| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is cshA [H]
Identifier: 153936987
GI number: 153936987
Start: 2078058
End: 2079188
Strand: Direct
Name: cshA [H]
Synonym: CLC_1957
Alternate gene names: 153936987
Gene position: 2078058-2079188 (Clockwise)
Preceding gene: 153937708
Following gene: 153936310
Centisome position: 55.26
GC content: 31.03
Gene sequence:
>1131_bases ATGATAAAATTTGAAGAACTAGGTCTTAGTGATAGTATAATAGATGTTCTTAAAAAGCAAAGAATCATTGAGCCAACACC AATTCAAGAAGAAAGTATTATGTTGATAAAAAGTGGTAATGATGTTATAGCTGAAGCTCAAACTGGAACTGGGAAAACCC TTGCATTTTTACTTCCAATGTTTGAAAATATATCTCCTGATATAGACGCAATTCAAGGTTTAATAATAACACCTACAAGA GAACTTGCTATACAAATAACTGAGGAAGCTATGAAGTTAAAAGAAGCCAAAGATTTGAATATTTTAGCTGCCTATGGTGG TAAAGATATAGGCTCACAAATAAAAAAACTTAAAAATAATATACATTTGGTAATTGCAACTCCCGGTAGACTTTTAGATC ATCTTAATAGAAACACACTAAATTTTAAAGATTTAAAAACATTAGTATTAGATGAAGCTGATGAAATGCTCCTTATGGGA TTTAAGAATGATGTTCGATCTATTATAGAGAATACACCAAGGAAACGCCAAACACTATGTTTTTCAGCAACAATGAATTC TGAAGTTAAAAAGCTAGCCTATAAAAACATGCGTGATCCCAAACTAATAATAATAGAAAAAGAAGAAGTAACTCTTAAAA ATATCAAACAAGTTTTAATAGAAACCACTGACAGAAGAAAGCAAGAGGATTTGTGCAAAATATTAGATGAAGAAAATCCA TTTATGGCTATTATCTTTTGTAGAACCAAAAGAAGAGTTGATACTCTTGAGGAAGCACTTTATAAAAAGGGTTATAACTG TGAAAAGCTTCATGGTAGCATAACTCAACCAAAGCGTGAAAGAATAATGCGTTCCTTTAAAAATTTAGAAATTCAATATT TAATAGCTACGGATGTAGCAGCTAGAGGGCTTGATATAACTGGTGTTACTCATGTTTTTAACTATGATATTCCAGAAAAT GCCGAAAGCTATATACACCGTATAGGCAGAACTGGGAGAGCTGGTGAAAAGGGATATACATTCCTATTTGTAGCACCCAA AGATGAACAAACTTTAGGTATGATAGAAAAAGAAATTAAATTTAAAATTCCTAGAAGAGCTTTAACAAATTCTAAAGAGG ATAACAAATAA
Upstream 100 bases:
>100_bases CTCCCATGTTTCTTTTTATTATATTAAAAATGTGTTATACTTAGCTGATTTAACTTATAAAAAGCTAAAAATATATTTAA AAATTGAAAGGTAAATTATT
Downstream 100 bases:
>100_bases TCCTCTCTAGAATTGATTATATATCCATCTCAATACTATTCAAAGGCATTTCCTTGTATCGCTACTATATGAGCCTTATT TAACAATTCATCCAAAAGCA
Product: DEAD-box ATP dependent DNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MIKFEELGLSDSIIDVLKKQRIIEPTPIQEESIMLIKSGNDVIAEAQTGTGKTLAFLLPMFENISPDIDAIQGLIITPTR ELAIQITEEAMKLKEAKDLNILAAYGGKDIGSQIKKLKNNIHLVIATPGRLLDHLNRNTLNFKDLKTLVLDEADEMLLMG FKNDVRSIIENTPRKRQTLCFSATMNSEVKKLAYKNMRDPKLIIIEKEEVTLKNIKQVLIETTDRRKQEDLCKILDEENP FMAIIFCRTKRRVDTLEEALYKKGYNCEKLHGSITQPKRERIMRSFKNLEIQYLIATDVAARGLDITGVTHVFNYDIPEN AESYIHRIGRTGRAGEKGYTFLFVAPKDEQTLGMIEKEIKFKIPRRALTNSKEDNK
Sequences:
>Translated_376_residues MIKFEELGLSDSIIDVLKKQRIIEPTPIQEESIMLIKSGNDVIAEAQTGTGKTLAFLLPMFENISPDIDAIQGLIITPTR ELAIQITEEAMKLKEAKDLNILAAYGGKDIGSQIKKLKNNIHLVIATPGRLLDHLNRNTLNFKDLKTLVLDEADEMLLMG FKNDVRSIIENTPRKRQTLCFSATMNSEVKKLAYKNMRDPKLIIIEKEEVTLKNIKQVLIETTDRRKQEDLCKILDEENP FMAIIFCRTKRRVDTLEEALYKKGYNCEKLHGSITQPKRERIMRSFKNLEIQYLIATDVAARGLDITGVTHVFNYDIPEN AESYIHRIGRTGRAGEKGYTFLFVAPKDEQTLGMIEKEIKFKIPRRALTNSKEDNK >Mature_376_residues MIKFEELGLSDSIIDVLKKQRIIEPTPIQEESIMLIKSGNDVIAEAQTGTGKTLAFLLPMFENISPDIDAIQGLIITPTR ELAIQITEEAMKLKEAKDLNILAAYGGKDIGSQIKKLKNNIHLVIATPGRLLDHLNRNTLNFKDLKTLVLDEADEMLLMG FKNDVRSIIENTPRKRQTLCFSATMNSEVKKLAYKNMRDPKLIIIEKEEVTLKNIKQVLIETTDRRKQEDLCKILDEENP FMAIIFCRTKRRVDTLEEALYKKGYNCEKLHGSITQPKRERIMRSFKNLEIQYLIATDVAARGLDITGVTHVFNYDIPEN AESYIHRIGRTGRAGEKGYTFLFVAPKDEQTLGMIEKEIKFKIPRRALTNSKEDNK
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=361, Percent_Identity=38.2271468144044, Blast_Score=260, Evalue=1e-69, Organism=Homo sapiens, GI169881239, Length=368, Percent_Identity=38.8586956521739, Blast_Score=251, Evalue=7e-67, Organism=Homo sapiens, GI13514809, Length=368, Percent_Identity=38.8586956521739, Blast_Score=251, Evalue=7e-67, Organism=Homo sapiens, GI301171475, Length=366, Percent_Identity=39.0710382513661, Blast_Score=248, Evalue=5e-66, Organism=Homo sapiens, GI301171467, Length=365, Percent_Identity=39.1780821917808, Blast_Score=248, Evalue=6e-66, Organism=Homo sapiens, GI87196351, Length=365, Percent_Identity=39.1780821917808, Blast_Score=248, Evalue=7e-66, Organism=Homo sapiens, GI148613856, Length=357, Percent_Identity=38.9355742296919, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI38201710, Length=357, Percent_Identity=38.9355742296919, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI41327773, Length=367, Percent_Identity=37.874659400545, Blast_Score=239, Evalue=2e-63, Organism=Homo sapiens, GI4503529, Length=356, Percent_Identity=39.6067415730337, Blast_Score=239, Evalue=2e-63, Organism=Homo sapiens, GI4758138, Length=357, Percent_Identity=38.655462184874, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI20149629, Length=364, Percent_Identity=39.010989010989, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI164664518, Length=341, Percent_Identity=36.3636363636364, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI45446747, Length=358, Percent_Identity=36.5921787709497, Blast_Score=232, Evalue=4e-61, Organism=Homo sapiens, GI45446743, Length=358, Percent_Identity=36.5921787709497, Blast_Score=232, Evalue=4e-61, Organism=Homo sapiens, GI83700235, Length=355, Percent_Identity=38.8732394366197, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI222352149, Length=336, Percent_Identity=38.9880952380952, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI55749865, Length=340, Percent_Identity=37.0588235294118, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI41327771, Length=380, Percent_Identity=36.5789473684211, Blast_Score=219, Evalue=2e-57, Organism=Homo sapiens, GI31542656, Length=371, Percent_Identity=36.6576819407008, Blast_Score=218, Evalue=6e-57, Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=35.0140056022409, Blast_Score=218, Evalue=7e-57, Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=35.0140056022409, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=35.0140056022409, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=35.0140056022409, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI188035877, Length=369, Percent_Identity=34.4173441734417, Blast_Score=214, Evalue=8e-56, Organism=Homo sapiens, GI21071032, Length=355, Percent_Identity=36.9014084507042, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI224593278, Length=374, Percent_Identity=34.4919786096257, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI13514831, Length=374, Percent_Identity=35.5614973262032, Blast_Score=212, Evalue=4e-55, Organism=Homo sapiens, GI50659095, Length=390, Percent_Identity=34.3589743589744, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI13129006, Length=380, Percent_Identity=34.7368421052632, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI4758112, Length=330, Percent_Identity=32.7272727272727, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI18375623, Length=330, Percent_Identity=32.7272727272727, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI21040371, Length=330, Percent_Identity=32.7272727272727, Blast_Score=195, Evalue=5e-50, Organism=Homo sapiens, GI41327776, Length=362, Percent_Identity=34.8066298342541, Blast_Score=195, Evalue=5e-50, Organism=Homo sapiens, GI164419743, Length=347, Percent_Identity=32.5648414985591, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI51094101, Length=347, Percent_Identity=32.5648414985591, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI41327779, Length=369, Percent_Identity=32.520325203252, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI164419732, Length=331, Percent_Identity=35.6495468277946, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI8922886, Length=379, Percent_Identity=33.509234828496, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI6005743, Length=379, Percent_Identity=33.509234828496, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI62241022, Length=356, Percent_Identity=33.9887640449438, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI38327634, Length=366, Percent_Identity=33.0601092896175, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI62241024, Length=340, Percent_Identity=34.1176470588235, Blast_Score=168, Evalue=6e-42, Organism=Homo sapiens, GI256223453, Length=367, Percent_Identity=30.5177111716621, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI38569503, Length=343, Percent_Identity=33.2361516034985, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI38569505, Length=343, Percent_Identity=33.2361516034985, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=28.9672544080605, Blast_Score=158, Evalue=8e-39, Organism=Homo sapiens, GI4826686, Length=343, Percent_Identity=30.3206997084548, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI256773275, Length=394, Percent_Identity=29.1878172588832, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI9966805, Length=307, Percent_Identity=30.6188925081433, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI17505907, Length=410, Percent_Identity=27.0731707317073, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI154759257, Length=362, Percent_Identity=25.9668508287293, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=34.1013824884793, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI4557365, Length=357, Percent_Identity=26.3305322128852, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI51242943, Length=361, Percent_Identity=24.0997229916898, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI51242947, Length=361, Percent_Identity=24.0997229916898, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI148612816, Length=363, Percent_Identity=23.9669421487603, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI87082221, Length=370, Percent_Identity=42.972972972973, Blast_Score=306, Evalue=2e-84, Organism=Escherichia coli, GI1787016, Length=379, Percent_Identity=39.0501319261214, Blast_Score=273, Evalue=2e-74, Organism=Escherichia coli, GI1790214, Length=371, Percent_Identity=39.3530997304582, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI1787605, Length=339, Percent_Identity=38.0530973451327, Blast_Score=242, Evalue=3e-65, Organism=Escherichia coli, GI1788930, Length=364, Percent_Identity=35.4395604395604, Blast_Score=207, Evalue=8e-55, Organism=Escherichia coli, GI48994977, Length=340, Percent_Identity=24.1176470588235, Blast_Score=77, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71987143, Length=335, Percent_Identity=42.089552238806, Blast_Score=272, Evalue=2e-73, Organism=Caenorhabditis elegans, GI71995724, Length=356, Percent_Identity=37.9213483146067, Blast_Score=252, Evalue=2e-67, Organism=Caenorhabditis elegans, GI17507121, Length=362, Percent_Identity=37.292817679558, Blast_Score=252, Evalue=3e-67, Organism=Caenorhabditis elegans, GI17552114, Length=362, Percent_Identity=35.6353591160221, Blast_Score=251, Evalue=6e-67, Organism=Caenorhabditis elegans, GI17555296, Length=361, Percent_Identity=37.3961218836565, Blast_Score=242, Evalue=2e-64, Organism=Caenorhabditis elegans, GI86570094, Length=362, Percent_Identity=38.6740331491713, Blast_Score=240, Evalue=8e-64, Organism=Caenorhabditis elegans, GI115533224, Length=352, Percent_Identity=38.6363636363636, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=35.8839050131926, Blast_Score=228, Evalue=4e-60, Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=36.2397820163488, Blast_Score=224, Evalue=5e-59, Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=36.2397820163488, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=36.2397820163488, Blast_Score=224, Evalue=7e-59, Organism=Caenorhabditis elegans, GI17507945, Length=364, Percent_Identity=37.3626373626374, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI115532546, Length=371, Percent_Identity=35.3099730458221, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=35.8695652173913, Blast_Score=212, Evalue=2e-55, Organism=Caenorhabditis elegans, GI115532548, Length=371, Percent_Identity=35.0404312668464, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17509811, Length=374, Percent_Identity=34.4919786096257, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17552642, Length=383, Percent_Identity=34.2036553524804, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17537549, Length=372, Percent_Identity=34.4086021505376, Blast_Score=206, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17510559, Length=384, Percent_Identity=33.8541666666667, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI71999646, Length=346, Percent_Identity=31.7919075144509, Blast_Score=198, Evalue=4e-51, Organism=Caenorhabditis elegans, GI71999644, Length=349, Percent_Identity=31.8051575931232, Blast_Score=197, Evalue=9e-51, Organism=Caenorhabditis elegans, GI71982858, Length=365, Percent_Identity=30.1369863013699, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=35.4054054054054, Blast_Score=187, Evalue=6e-48, Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=34.4173441734417, Blast_Score=187, Evalue=7e-48, Organism=Caenorhabditis elegans, GI17507881, Length=352, Percent_Identity=36.3636363636364, Blast_Score=185, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17553716, Length=341, Percent_Identity=32.5513196480938, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17536099, Length=395, Percent_Identity=31.3924050632911, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17536101, Length=395, Percent_Identity=31.3924050632911, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17505370, Length=333, Percent_Identity=33.9339339339339, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71990816, Length=391, Percent_Identity=31.4578005115089, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17536103, Length=395, Percent_Identity=31.3924050632911, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=29.2263610315186, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17508543, Length=388, Percent_Identity=28.8659793814433, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17556951, Length=338, Percent_Identity=29.8816568047337, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI193208216, Length=395, Percent_Identity=30.126582278481, Blast_Score=147, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=29.5918367346939, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI32564046, Length=380, Percent_Identity=30.5263157894737, Blast_Score=140, Evalue=8e-34, Organism=Caenorhabditis elegans, GI25148203, Length=424, Percent_Identity=26.8867924528302, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI25148291, Length=367, Percent_Identity=25.3405994550409, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI71997889, Length=342, Percent_Identity=25.4385964912281, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71982862, Length=203, Percent_Identity=29.5566502463054, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17557982, Length=389, Percent_Identity=25.9640102827763, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71987152, Length=93, Percent_Identity=46.2365591397849, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI32564293, Length=357, Percent_Identity=26.3305322128852, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI25145561, Length=341, Percent_Identity=24.633431085044, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320224, Length=364, Percent_Identity=38.1868131868132, Blast_Score=255, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6324778, Length=363, Percent_Identity=38.0165289256198, Blast_Score=244, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6324217, Length=365, Percent_Identity=38.3561643835616, Blast_Score=243, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6325138, Length=376, Percent_Identity=37.5, Blast_Score=243, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=34.4444444444444, Blast_Score=233, Evalue=3e-62, Organism=Saccharomyces cerevisiae, GI6323021, Length=379, Percent_Identity=35.6200527704486, Blast_Score=216, Evalue=7e-57, Organism=Saccharomyces cerevisiae, GI6322912, Length=325, Percent_Identity=36, Blast_Score=215, Evalue=7e-57, Organism=Saccharomyces cerevisiae, GI6322323, Length=325, Percent_Identity=36, Blast_Score=215, Evalue=7e-57, Organism=Saccharomyces cerevisiae, GI6321856, Length=367, Percent_Identity=36.7847411444142, Blast_Score=215, Evalue=9e-57, Organism=Saccharomyces cerevisiae, GI6321360, Length=363, Percent_Identity=37.7410468319559, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=35.1648351648352, Blast_Score=209, Evalue=7e-55, Organism=Saccharomyces cerevisiae, GI6321963, Length=380, Percent_Identity=36.3157894736842, Blast_Score=202, Evalue=7e-53, Organism=Saccharomyces cerevisiae, GI6323947, Length=372, Percent_Identity=36.0215053763441, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6320449, Length=377, Percent_Identity=35.8090185676393, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6320119, Length=362, Percent_Identity=32.3204419889503, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6320173, Length=399, Percent_Identity=28.3208020050125, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6319618, Length=421, Percent_Identity=33.9667458432304, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6324620, Length=358, Percent_Identity=32.4022346368715, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6320400, Length=363, Percent_Identity=35.5371900826446, Blast_Score=172, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6319714, Length=372, Percent_Identity=30.6451612903226, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6321267, Length=321, Percent_Identity=36.7601246105919, Blast_Score=163, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6322876, Length=431, Percent_Identity=29.4663573085847, Blast_Score=146, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6323306, Length=415, Percent_Identity=28.433734939759, Blast_Score=140, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6321111, Length=344, Percent_Identity=29.3604651162791, Blast_Score=138, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6324366, Length=359, Percent_Identity=27.0194986072423, Blast_Score=129, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6321374, Length=447, Percent_Identity=26.6219239373602, Blast_Score=93, Evalue=9e-20, Organism=Drosophila melanogaster, GI24645031, Length=335, Percent_Identity=39.7014925373134, Blast_Score=254, Evalue=9e-68, Organism=Drosophila melanogaster, GI24584399, Length=356, Percent_Identity=41.0112359550562, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644479, Length=351, Percent_Identity=39.3162393162393, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI281361218, Length=351, Percent_Identity=39.3162393162393, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI24644481, Length=351, Percent_Identity=39.3162393162393, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI24644487, Length=351, Percent_Identity=39.3162393162393, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI45551833, Length=351, Percent_Identity=39.3162393162393, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI24644485, Length=351, Percent_Identity=39.3162393162393, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI24642151, Length=361, Percent_Identity=38.5041551246537, Blast_Score=244, Evalue=9e-65, Organism=Drosophila melanogaster, GI24644483, Length=351, Percent_Identity=39.3162393162393, Blast_Score=244, Evalue=9e-65, Organism=Drosophila melanogaster, GI24662330, Length=368, Percent_Identity=36.6847826086957, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI17985987, Length=374, Percent_Identity=37.7005347593583, Blast_Score=241, Evalue=8e-64, Organism=Drosophila melanogaster, GI28574962, Length=351, Percent_Identity=39.031339031339, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI24583281, Length=361, Percent_Identity=35.1800554016621, Blast_Score=236, Evalue=1e-62, Organism=Drosophila melanogaster, GI24583279, Length=361, Percent_Identity=35.1800554016621, Blast_Score=236, Evalue=1e-62, Organism=Drosophila melanogaster, GI24582080, Length=359, Percent_Identity=38.1615598885794, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI24582078, Length=359, Percent_Identity=38.1615598885794, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI17136248, Length=359, Percent_Identity=38.1615598885794, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI24582075, Length=359, Percent_Identity=38.1615598885794, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=37.2602739726027, Blast_Score=224, Evalue=7e-59, Organism=Drosophila melanogaster, GI24585582, Length=352, Percent_Identity=38.3522727272727, Blast_Score=224, Evalue=9e-59, Organism=Drosophila melanogaster, GI24584994, Length=383, Percent_Identity=37.3368146214099, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI17136814, Length=368, Percent_Identity=38.0434782608696, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI21355075, Length=351, Percent_Identity=35.8974358974359, Blast_Score=208, Evalue=5e-54, Organism=Drosophila melanogaster, GI17977678, Length=368, Percent_Identity=34.5108695652174, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI21356161, Length=379, Percent_Identity=36.4116094986807, Blast_Score=205, Evalue=3e-53, Organism=Drosophila melanogaster, GI17647335, Length=356, Percent_Identity=32.8651685393258, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=37.5, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=33.6, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24581954, Length=331, Percent_Identity=32.6283987915408, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24581952, Length=331, Percent_Identity=32.6283987915408, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24581956, Length=331, Percent_Identity=32.6283987915408, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI21355559, Length=400, Percent_Identity=33.25, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI18859659, Length=427, Percent_Identity=31.1475409836066, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI28571338, Length=427, Percent_Identity=31.1475409836066, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI28575014, Length=353, Percent_Identity=30.8781869688385, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI28571808, Length=368, Percent_Identity=32.3369565217391, Blast_Score=175, Evalue=3e-44, Organism=Drosophila melanogaster, GI28571809, Length=368, Percent_Identity=32.3369565217391, Blast_Score=175, Evalue=3e-44, Organism=Drosophila melanogaster, GI24668515, Length=339, Percent_Identity=31.2684365781711, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24666101, Length=345, Percent_Identity=29.8550724637681, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI20130173, Length=309, Percent_Identity=31.0679611650485, Blast_Score=138, Evalue=7e-33, Organism=Drosophila melanogaster, GI24643725, Length=411, Percent_Identity=25.7907542579075, Blast_Score=128, Evalue=8e-30, Organism=Drosophila melanogaster, GI24640164, Length=349, Percent_Identity=25.7879656160458, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI19920478, Length=331, Percent_Identity=25.9818731117825, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI17136666, Length=412, Percent_Identity=25.2427184466019, Blast_Score=111, Evalue=7e-25, Organism=Drosophila melanogaster, GI24646066, Length=328, Percent_Identity=24.390243902439, Blast_Score=78, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 42953; Mature: 42953
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFEELGLSDSIIDVLKKQRIIEPTPIQEESIMLIKSGNDVIAEAQTGTGKTLAFLLPM CCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHH FENISPDIDAIQGLIITPTRELAIQITEEAMKLKEAKDLNILAAYGGKDIGSQIKKLKNN HHCCCCCHHHHCCEEECCCHHHHEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCC IHLVIATPGRLLDHLNRNTLNFKDLKTLVLDEADEMLLMGFKNDVRSIIENTPRKRQTLC EEEEEECCHHHHHHCCCCCCCHHHHHHHHHCCCCHHEEHHHHHHHHHHHHCCCCHHHEEE FSATMNSEVKKLAYKNMRDPKLIIIEKEEVTLKNIKQVLIETTDRRKQEDLCKILDEENP EEHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FMAIIFCRTKRRVDTLEEALYKKGYNCEKLHGSITQPKRERIMRSFKNLEIQYLIATDVA EEEEEEECCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHCCEEEEEEEECHH ARGLDITGVTHVFNYDIPENAESYIHRIGRTGRAGEKGYTFLFVAPKDEQTLGMIEKEIK HCCCCEECEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH FKIPRRALTNSKEDNK HCCCHHHHCCCCCCCC >Mature Secondary Structure MIKFEELGLSDSIIDVLKKQRIIEPTPIQEESIMLIKSGNDVIAEAQTGTGKTLAFLLPM CCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHH FENISPDIDAIQGLIITPTRELAIQITEEAMKLKEAKDLNILAAYGGKDIGSQIKKLKNN HHCCCCCHHHHCCEEECCCHHHHEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCC IHLVIATPGRLLDHLNRNTLNFKDLKTLVLDEADEMLLMGFKNDVRSIIENTPRKRQTLC EEEEEECCHHHHHHCCCCCCCHHHHHHHHHCCCCHHEEHHHHHHHHHHHHCCCCHHHEEE FSATMNSEVKKLAYKNMRDPKLIIIEKEEVTLKNIKQVLIETTDRRKQEDLCKILDEENP EEHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FMAIIFCRTKRRVDTLEEALYKKGYNCEKLHGSITQPKRERIMRSFKNLEIQYLIATDVA EEEEEEECCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHCCEEEEEEEECHH ARGLDITGVTHVFNYDIPENAESYIHRIGRTGRAGEKGYTFLFVAPKDEQTLGMIEKEIK HCCCCEECEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH FKIPRRALTNSKEDNK HCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12721630 [H]