Click here to switch to the map view.

The map label for this gene is 153936977

Identifier: 153936977

GI number: 153936977

Start: 1298838

End: 1299755

Strand: Direct

Name: 153936977

Synonym: CLC_1251

Alternate gene names: NA

Gene position: 1298838-1299755 (Clockwise)

Preceding gene: 153937506

Following gene: 153936122

Centisome position: 34.54

GC content: 32.79

Gene sequence:

>918_bases
ATGATGTCAATGGAAGAAATGAGAGATTGTCACGATAGAAATATGAGTTTTGATAAAGGTCATGGAAATGATTGTCATGA
GCACCATCATAACGAGTGCCATGAGCACCATCATAACGAGTGCCATGAACATTCTCACAACGAGTGCCATGAACATTCTC
ATAAAGATTGTGGGAAAGTACTAGAAAGTAAAACTGTACCAATGTGTGAAGGAACTAATCTAACACCACAAACAGTAAGA
AGACCAGTGGTAGCTAAGATACCAGTAGTACTCGCAGAAAAAGAGATACAAATAGATGTAGAGTCTAAAACAAGATTAAA
AGAAAAATTCTTAGAAATAAAGAGAATAAAAAAAGATGTATTTTTAACTCAATGTGAATTAATACCAAGAGCAGGTGTTA
TAGAAAATGGTGTTCCTAGAACAGCAAAATTATTTATAAGTGGATTTATTAGAAAAAATATAGAATTTGCTACTGCAGAC
TGTATAAAAGATGATGTAGTAAGTGGTGAAATAAAGCATACTACAGAAAAGATACCATTTACTTGCGTAACAGAGGTAAG
GTATATAACTCCTCCGGTATTAGCTAATAGAGAAAGACAGCGAGAAATGGAGTTATTCTGTAGTGAACGTCAGTGTGAAC
AGGAATGTAATTGTGAAGAGGAAAAACTAGGAAGACTTACTTGTCAAGAATTTTTAGAAGATTCAATAACACTTGTAGAA
AAACCATTCTGTGAATTATTAGGAGCTAGAATATTTGAAGCAGATATACAAAGAAAACCTTGTTTTGAAAAAGGTGTAAA
AGTTTTTGATGAATTAGTAGAGAAAATGGTAGTTTTCATTAGAGTAAAAGTTTTACAGTTGCAACAAGTAACTGTAGGTG
ATCCAAATAACGGTTCAGAAGATGGTTGTAGAAAATAA

Upstream 100 bases:

>100_bases
TCCATCATAATATATAGTATAAGTTATAAAATCAAATTACAAGTAATAATAATCAATCAAATAAGCTTTAAATAAATATT
TTAAAACTAGGGAGGAATAA

Downstream 100 bases:

>100_bases
TACAGAAAATTGCTAATGATAAGATTAATAATAAATAATGCTTAAGATAATTTAGGAGAAAGGATTTCTCCTAAATTATC
TAATTTTATATGTGGATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MMSMEEMRDCHDRNMSFDKGHGNDCHEHHHNECHEHHHNECHEHSHNECHEHSHKDCGKVLESKTVPMCEGTNLTPQTVR
RPVVAKIPVVLAEKEIQIDVESKTRLKEKFLEIKRIKKDVFLTQCELIPRAGVIENGVPRTAKLFISGFIRKNIEFATAD
CIKDDVVSGEIKHTTEKIPFTCVTEVRYITPPVLANRERQREMELFCSERQCEQECNCEEEKLGRLTCQEFLEDSITLVE
KPFCELLGARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNGSEDGCRK

Sequences:

>Translated_305_residues
MMSMEEMRDCHDRNMSFDKGHGNDCHEHHHNECHEHHHNECHEHSHNECHEHSHKDCGKVLESKTVPMCEGTNLTPQTVR
RPVVAKIPVVLAEKEIQIDVESKTRLKEKFLEIKRIKKDVFLTQCELIPRAGVIENGVPRTAKLFISGFIRKNIEFATAD
CIKDDVVSGEIKHTTEKIPFTCVTEVRYITPPVLANRERQREMELFCSERQCEQECNCEEEKLGRLTCQEFLEDSITLVE
KPFCELLGARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNGSEDGCRK
>Mature_305_residues
MMSMEEMRDCHDRNMSFDKGHGNDCHEHHHNECHEHHHNECHEHSHNECHEHSHKDCGKVLESKTVPMCEGTNLTPQTVR
RPVVAKIPVVLAEKEIQIDVESKTRLKEKFLEIKRIKKDVFLTQCELIPRAGVIENGVPRTAKLFISGFIRKNIEFATAD
CIKDDVVSGEIKHTTEKIPFTCVTEVRYITPPVLANRERQREMELFCSERQCEQECNCEEEKLGRLTCQEFLEDSITLVE
KPFCELLGARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNGSEDGCRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35265; Mature: 35265

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSMEEMRDCHDRNMSFDKGHGNDCHEHHHNECHEHHHNECHEHSHNECHEHSHKDCGKV
CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LESKTVPMCEGTNLTPQTVRRPVVAKIPVVLAEKEIQIDVESKTRLKEKFLEIKRIKKDV
HHHCCCCCCCCCCCCHHHHHCCHHHHCCHHEECCEEEEECCHHHHHHHHHHHHHHHHHHH
FLTQCELIPRAGVIENGVPRTAKLFISGFIRKNIEFATADCIKDDVVSGEIKHTTEKIPF
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCC
TCVTEVRYITPPVLANRERQREMELFCSERQCEQECNCEEEKLGRLTCQEFLEDSITLVE
CEEHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KPFCELLGARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNGSE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
DGCRK
CCCCC
>Mature Secondary Structure
MMSMEEMRDCHDRNMSFDKGHGNDCHEHHHNECHEHHHNECHEHSHNECHEHSHKDCGKV
CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LESKTVPMCEGTNLTPQTVRRPVVAKIPVVLAEKEIQIDVESKTRLKEKFLEIKRIKKDV
HHHCCCCCCCCCCCCHHHHHCCHHHHCCHHEECCEEEEECCHHHHHHHHHHHHHHHHHHH
FLTQCELIPRAGVIENGVPRTAKLFISGFIRKNIEFATADCIKDDVVSGEIKHTTEKIPF
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCC
TCVTEVRYITPPVLANRERQREMELFCSERQCEQECNCEEEKLGRLTCQEFLEDSITLVE
CEEHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KPFCELLGARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNGSE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
DGCRK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA