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The map label for this gene is 153936967

Identifier: 153936967

GI number: 153936967

Start: 2136386

End: 2137183

Strand: Reverse

Name: 153936967

Synonym: CLC_2013

Alternate gene names: NA

Gene position: 2137183-2136386 (Counterclockwise)

Preceding gene: 153935042

Following gene: 153936323

Centisome position: 56.83

GC content: 33.08

Gene sequence:

>798_bases
ATGGAGGTCATACTTAAAACTATGGAATCAGAATATTTAAGAAAAAATGAGTTAAGTGAAAAATTGTTAGCTTACTATGA
AGAATCTTGTTTAGATCAGAGTGTTTTGATTGGGTCATTGATTTCACAAGAAGCAAGGGAATTTATTGTGAACAATGCTA
ATGCATTCATTTTTGGATTAATATCTGATCAATCTACAAAAGCTGAATTAGCGTGGTCTTTACCATTTCACTTAAAGAAA
AGACTAGGTCATTATGATATGCACAAGATGGGTAGTGAGGGATATGAGCATGAAATAGAGGCGGCGATAAAAGATAAGCC
TGCTTTACATAGATATCCAGGAAGAATAGCTAATTATCTTTATTTAGCGAGTAAGCATATTATAGATAATTATCAAGGAA
ATGTTGCTAATATTTGGTCAAGTACAGACAGTGCTAAAGAAATAATTGCCCGATTATGTGCTTTTAAAGGTATTAGTTCA
AAAAAAGCTGCTCTTGGAACAATGTTATTAGTAAGAGATAAAGGCGTCTATGTAAAGGATGCTCATATTATTGATATTGC
TTATGATATACATGTTAGAAGAGTCTTCTTAAGAATTGGATTGGTTAAGAGTGATACATTGGAGCAAGTGACTGAAGTGG
CGAAACTAATTTATCCTGATTTTCCAGGAAAACTTACTACTCCTATTTGGGTTATTGGAAGGGAATATTGCCGACCAACA
AGCCCATTATGTGATAATTGTCCTATTTCTAACTTATGCGAAAGAAAAATTCATTTAGGCGGAGATATACGTGCATAA

Upstream 100 bases:

>100_bases
ACCCTGTTAAATAAATAAGAATAGCTATATTGTAGAGGGACCTATGGTAGAGAAAGATGCATTGTTAGTGAAGAATACTT
ATTAAAAATGGAGCAAAAAG

Downstream 100 bases:

>100_bases
TTAGATTGAAACTAATATTCATATTGAAGAGTTTTGTATGTCCCTCAGACTTTAGATTTGAGGGACTTTTTGGTTAAGAT
GGGTGAACTTTTATGCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: HhH-GPD; Hhh-Gpd Family DNA Repair Protein; HhH-GPD Protein

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MEVILKTMESEYLRKNELSEKLLAYYEESCLDQSVLIGSLISQEAREFIVNNANAFIFGLISDQSTKAELAWSLPFHLKK
RLGHYDMHKMGSEGYEHEIEAAIKDKPALHRYPGRIANYLYLASKHIIDNYQGNVANIWSSTDSAKEIIARLCAFKGISS
KKAALGTMLLVRDKGVYVKDAHIIDIAYDIHVRRVFLRIGLVKSDTLEQVTEVAKLIYPDFPGKLTTPIWVIGREYCRPT
SPLCDNCPISNLCERKIHLGGDIRA

Sequences:

>Translated_265_residues
MEVILKTMESEYLRKNELSEKLLAYYEESCLDQSVLIGSLISQEAREFIVNNANAFIFGLISDQSTKAELAWSLPFHLKK
RLGHYDMHKMGSEGYEHEIEAAIKDKPALHRYPGRIANYLYLASKHIIDNYQGNVANIWSSTDSAKEIIARLCAFKGISS
KKAALGTMLLVRDKGVYVKDAHIIDIAYDIHVRRVFLRIGLVKSDTLEQVTEVAKLIYPDFPGKLTTPIWVIGREYCRPT
SPLCDNCPISNLCERKIHLGGDIRA
>Mature_265_residues
MEVILKTMESEYLRKNELSEKLLAYYEESCLDQSVLIGSLISQEAREFIVNNANAFIFGLISDQSTKAELAWSLPFHLKK
RLGHYDMHKMGSEGYEHEIEAAIKDKPALHRYPGRIANYLYLASKHIIDNYQGNVANIWSSTDSAKEIIARLCAFKGISS
KKAALGTMLLVRDKGVYVKDAHIIDIAYDIHVRRVFLRIGLVKSDTLEQVTEVAKLIYPDFPGKLTTPIWVIGREYCRPT
SPLCDNCPISNLCERKIHLGGDIRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30020; Mature: 30020

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS00764 ENDONUCLEASE_III_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVILKTMESEYLRKNELSEKLLAYYEESCLDQSVLIGSLISQEAREFIVNNANAFIFGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
ISDQSTKAELAWSLPFHLKKRLGHYDMHKMGSEGYEHEIEAAIKDKPALHRYPGRIANYL
ECCCCCCCCEEECCCHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCCCHHHCCHHHHHHH
YLASKHIIDNYQGNVANIWSSTDSAKEIIARLCAFKGISSKKAALGTMLLVRDKGVYVKD
HHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHEEEEEECCCEEEEC
AHIIDIAYDIHVRRVFLRIGLVKSDTLEQVTEVAKLIYPDFPGKLTTPIWVIGREYCRPT
CEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHEECHHHCCCC
SPLCDNCPISNLCERKIHLGGDIRA
CCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEVILKTMESEYLRKNELSEKLLAYYEESCLDQSVLIGSLISQEAREFIVNNANAFIFGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
ISDQSTKAELAWSLPFHLKKRLGHYDMHKMGSEGYEHEIEAAIKDKPALHRYPGRIANYL
ECCCCCCCCEEECCCHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCCCHHHCCHHHHHHH
YLASKHIIDNYQGNVANIWSSTDSAKEIIARLCAFKGISSKKAALGTMLLVRDKGVYVKD
HHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHEEEEEECCCEEEEC
AHIIDIAYDIHVRRVFLRIGLVKSDTLEQVTEVAKLIYPDFPGKLTTPIWVIGREYCRPT
CEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHEECHHHCCCC
SPLCDNCPISNLCERKIHLGGDIRA
CCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA