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The map label for this gene is ytlD [H]

Identifier: 153936956

GI number: 153936956

Start: 3252471

End: 3253274

Strand: Direct

Name: ytlD [H]

Synonym: CLC_3082

Alternate gene names: 153936956

Gene position: 3252471-3253274 (Clockwise)

Preceding gene: 153934788

Following gene: 153937123

Centisome position: 86.49

GC content: 28.36

Gene sequence:

>804_bases
ATGATAGATGAAAAAAAGGAACACGAACTATATATTAAAAAGGTAAAAAGTAGAAAAAATAAGATAATAATAACAAGACT
CATAATATTAATAGCCATTTTTGTATTATGGGAAATAGCTGGAAACTTAGGCTGGATAGATCCTTTTTTAACTAGTACTC
CATCTAGAATGTGGAAAAGCCTAGTGAAAATCTATAGTGAAGGTACATTGTTTAAGCATATATGGATAACTTGTTATGAA
ACTATTTTAGGCTTTATTTACGGTACATTACTAGGAGCTTTTATAGCTATACTCCTTTGGTGGTCAGATTTTGCCTGTAA
AGTTTTAGATCCTTATATTGTAGTATTAAATGCACTACCTAAAGTAGCACTAGCTCCTATTATAATTTTTTGGGTTGGTA
ATGGTACTAATGCTATAATAATGATAGCGCTTTTAATTTCCATTGTTGTAACTATAATTTCTGTATTGAATGGATTTAAA
GAAGTTGATAATGATAAAATAAGATTAATGAAAACTTTTGGGGCTACTAAATGGCAAATATTAATTCATTTAATAATCCC
TGCTACAATCCCAACTTTAATATCTACCTTAAAAATTAATGTGGGCTTATCCTGGGTAGGAGTAATAATGGGAGAATTTT
TAGTAGCCAAAGAAGGTTTAGGATTCTTAATTATTTATGGTGGACAAATTTCTCAACTAGATATGGTAATGTTTAGTATA
ATAATATTGGCTATTCTAGCTTATTTAATGTATGCAGTAGTAGAGTTTTTAGAAAAAAGAATATCTTTAAAGATTAAGCA
TTAA

Upstream 100 bases:

>100_bases
CTATTAAACTTTCAACAAAATCTAACTCTCCCTTAAAATGTAGAGAGGCTCCAGAATTTAGAGTGTATTTTAACGATATA
TGGAAGGAGCTGAATGACAT

Downstream 100 bases:

>100_bases
AAATAATTTTTTATTTTAATAAGTCTATTTAGAAATTTTTTTCTGAATAGATTTATTTTTTTTGCATAAAAATAACATAA
ATGGATATTATAATAATACA

Product: ABC transporter, permease protein

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MIDEKKEHELYIKKVKSRKNKIIITRLIILIAIFVLWEIAGNLGWIDPFLTSTPSRMWKSLVKIYSEGTLFKHIWITCYE
TILGFIYGTLLGAFIAILLWWSDFACKVLDPYIVVLNALPKVALAPIIIFWVGNGTNAIIMIALLISIVVTIISVLNGFK
EVDNDKIRLMKTFGATKWQILIHLIIPATIPTLISTLKINVGLSWVGVIMGEFLVAKEGLGFLIIYGGQISQLDMVMFSI
IILAILAYLMYAVVEFLEKRISLKIKH

Sequences:

>Translated_267_residues
MIDEKKEHELYIKKVKSRKNKIIITRLIILIAIFVLWEIAGNLGWIDPFLTSTPSRMWKSLVKIYSEGTLFKHIWITCYE
TILGFIYGTLLGAFIAILLWWSDFACKVLDPYIVVLNALPKVALAPIIIFWVGNGTNAIIMIALLISIVVTIISVLNGFK
EVDNDKIRLMKTFGATKWQILIHLIIPATIPTLISTLKINVGLSWVGVIMGEFLVAKEGLGFLIIYGGQISQLDMVMFSI
IILAILAYLMYAVVEFLEKRISLKIKH
>Mature_267_residues
MIDEKKEHELYIKKVKSRKNKIIITRLIILIAIFVLWEIAGNLGWIDPFLTSTPSRMWKSLVKIYSEGTLFKHIWITCYE
TILGFIYGTLLGAFIAILLWWSDFACKVLDPYIVVLNALPKVALAPIIIFWVGNGTNAIIMIALLISIVVTIISVLNGFK
EVDNDKIRLMKTFGATKWQILIHLIIPATIPTLISTLKINVGLSWVGVIMGEFLVAKEGLGFLIIYGGQISQLDMVMFSI
IILAILAYLMYAVVEFLEKRISLKIKH

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=272, Percent_Identity=26.4705882352941, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87081802, Length=229, Percent_Identity=25.3275109170306, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30210; Mature: 30210

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDEKKEHELYIKKVKSRKNKIIITRLIILIAIFVLWEIAGNLGWIDPFLTSTPSRMWKS
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHH
LVKIYSEGTLFKHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLDPYIVVLNALP
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KVALAPIIIFWVGNGTNAIIMIALLISIVVTIISVLNGFKEVDNDKIRLMKTFGATKWQI
HHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHH
LIHLIIPATIPTLISTLKINVGLSWVGVIMGEFLVAKEGLGFLIIYGGQISQLDMVMFSI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
IILAILAYLMYAVVEFLEKRISLKIKH
HHHHHHHHHHHHHHHHHHHHHCEECCC
>Mature Secondary Structure
MIDEKKEHELYIKKVKSRKNKIIITRLIILIAIFVLWEIAGNLGWIDPFLTSTPSRMWKS
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHH
LVKIYSEGTLFKHIWITCYETILGFIYGTLLGAFIAILLWWSDFACKVLDPYIVVLNALP
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KVALAPIIIFWVGNGTNAIIMIALLISIVVTIISVLNGFKEVDNDKIRLMKTFGATKWQI
HHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHH
LIHLIIPATIPTLISTLKINVGLSWVGVIMGEFLVAKEGLGFLIIYGGQISQLDMVMFSI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
IILAILAYLMYAVVEFLEKRISLKIKH
HHHHHHHHHHHHHHHHHHHHHCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]