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The map label for this gene is 153936903

Identifier: 153936903

GI number: 153936903

Start: 972940

End: 973803

Strand: Direct

Name: 153936903

Synonym: CLC_0948

Alternate gene names: NA

Gene position: 972940-973803 (Clockwise)

Preceding gene: 153935271

Following gene: 153935430

Centisome position: 25.87

GC content: 32.18

Gene sequence:

>864_bases
ATGTGGGTATTATTTGCATTTGCTTCAGCATTTTTTGCTGGGATTACAGCTATTTTAGCTAAGATCGGAATAAGAAATAC
AGATTCTAATTTAGCAACTGCAATCAGGACTATTATTATATTAATTTTTTCATGGCTCATGGTTTTTATTATTGGTTCTC
AAAATTTCATTTATCAAATAAGTGGACAAAGCTTACTTTTTTTGATATTGTCAGGATTGGCAACAGGAGCTTCCTGGCTT
TGTTATTTCAAGGCTCTCCAGGTTGGAGATGTAAATAAAGTAACTCCAATTGATAAATCAAGTATCGTATTGACCATGAT
TTTGGCTTTTATATTTTTAGATGAAAAGATTACTTGGATAAAATTCATTGGTATGTGTGCAATAGGTATAGGTACATATA
TGATGATAACAAAAAAAGAAGTGGAAATTAAGGAAGCAAGTGATAACAGATGGTTATTTTACGCTGCGTTGTCAGCAGTA
TTTGCGAGCCTTACTTCCATTCTTGGAAAAGTGGGAATCAGCGGAATTGAGTCAAATTTGGGAACTGCACTCAGAACCAT
TGTTGTATTGATTATGGCTTGGGTAGTAGTTTTTGTTTCGAAAAAACAAGGTGAAATTAAAAACATCGATAAAAAAAGTT
GGTTATTTATTTGCCTTTCAGGCATTACAACAGGTTCTTCCTGGCTTTGTTATTATAGGGCTTTGCAAATAGGTCCAGCA
AGTATAGTTGTACCAATAGATAAATTAAGCATTGTTGTTTCAATTGCATTTTCGTATTTTATCTTAAAAGAAAAACTTAC
AAAAAAGTCATTTTCAGGTCTGGCAATAATTGTAATAGGCACTTTGTTACTTTTGGTAAAATAA

Upstream 100 bases:

>100_bases
ACTTACTTAATGTATTAGCGACACAAAATAGTATGGATTTTGTAACAAAAATTAGTGTTGCAGTAAAGTAACAAAAATAA
ATAGGAAGAAGGAAATTTTA

Downstream 100 bases:

>100_bases
TTTTAGAAAATTACTAAGCTTAATATGTGAAGATAAGTATTTATTTAAGCATCCATTATTCATGGATTGAATTTTGGGGT
GTTTTTACGCTGCACTTCAA

Product: DMT family permease

Products: NA

Alternate protein names: ORF6 [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MWVLFAFASAFFAGITAILAKIGIRNTDSNLATAIRTIIILIFSWLMVFIIGSQNFIYQISGQSLLFLILSGLATGASWL
CYFKALQVGDVNKVTPIDKSSIVLTMILAFIFLDEKITWIKFIGMCAIGIGTYMMITKKEVEIKEASDNRWLFYAALSAV
FASLTSILGKVGISGIESNLGTALRTIVVLIMAWVVVFVSKKQGEIKNIDKKSWLFICLSGITTGSSWLCYYRALQIGPA
SIVVPIDKLSIVVSIAFSYFILKEKLTKKSFSGLAIIVIGTLLLLVK

Sequences:

>Translated_287_residues
MWVLFAFASAFFAGITAILAKIGIRNTDSNLATAIRTIIILIFSWLMVFIIGSQNFIYQISGQSLLFLILSGLATGASWL
CYFKALQVGDVNKVTPIDKSSIVLTMILAFIFLDEKITWIKFIGMCAIGIGTYMMITKKEVEIKEASDNRWLFYAALSAV
FASLTSILGKVGISGIESNLGTALRTIVVLIMAWVVVFVSKKQGEIKNIDKKSWLFICLSGITTGSSWLCYYRALQIGPA
SIVVPIDKLSIVVSIAFSYFILKEKLTKKSFSGLAIIVIGTLLLLVK
>Mature_287_residues
MWVLFAFASAFFAGITAILAKIGIRNTDSNLATAIRTIIILIFSWLMVFIIGSQNFIYQISGQSLLFLILSGLATGASWL
CYFKALQVGDVNKVTPIDKSSIVLTMILAFIFLDEKITWIKFIGMCAIGIGTYMMITKKEVEIKEASDNRWLFYAALSAV
FASLTSILGKVGISGIESNLGTALRTIVVLIMAWVVVFVSKKQGEIKNIDKKSWLFICLSGITTGSSWLCYYRALQIGPA
SIVVPIDKLSIVVSIAFSYFILKEKLTKKSFSGLAIIVIGTLLLLVK

Specific function: Unknown

COG id: COG2510

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31530; Mature: 31530

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWVLFAFASAFFAGITAILAKIGIRNTDSNLATAIRTIIILIFSWLMVFIIGSQNFIYQI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
SGQSLLFLILSGLATGASWLCYFKALQVGDVNKVTPIDKSSIVLTMILAFIFLDEKITWI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHH
KFIGMCAIGIGTYMMITKKEVEIKEASDNRWLFYAALSAVFASLTSILGKVGISGIESNL
HHHHHHHHHHHHHEEEEECCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHH
GTALRTIVVLIMAWVVVFVSKKQGEIKNIDKKSWLFICLSGITTGSSWLCYYRALQIGPA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCC
SIVVPIDKLSIVVSIAFSYFILKEKLTKKSFSGLAIIVIGTLLLLVK
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MWVLFAFASAFFAGITAILAKIGIRNTDSNLATAIRTIIILIFSWLMVFIIGSQNFIYQI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
SGQSLLFLILSGLATGASWLCYFKALQVGDVNKVTPIDKSSIVLTMILAFIFLDEKITWI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHH
KFIGMCAIGIGTYMMITKKEVEIKEASDNRWLFYAALSAVFASLTSILGKVGISGIESNL
HHHHHHHHHHHHHEEEEECCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHH
GTALRTIVVLIMAWVVVFVSKKQGEIKNIDKKSWLFICLSGITTGSSWLCYYRALQIGPA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCC
SIVVPIDKLSIVVSIAFSYFILKEKLTKKSFSGLAIIVIGTLLLLVK
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]