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The map label for this gene is uvrD [C]

Identifier: 153936821

GI number: 153936821

Start: 1520090

End: 1520488

Strand: Direct

Name: uvrD [C]

Synonym: CLC_1465

Alternate gene names: 153936821

Gene position: 1520090-1520488 (Clockwise)

Preceding gene: 153937553

Following gene: 153935591

Centisome position: 40.42

GC content: 24.81

Gene sequence:

>399_bases
ATGGAATTTAAAAATATAGTTATTGTGAATTGTAACGAAGGTAATATTCCTTACAGTAAAGCAGATGAGGAAGTTAATAT
AGAGGAAGAGAGAAGACTTTTTTATGTAGGTATCACAAGGGCAAAAGAAAATTTATATTTAACTGTACCAAAGGTTATAA
GAGGGAAAAATAAAGAAAACTCTAATTTTATAAAGGAATGCAAGTTAGATAAAGAATTATTAGAAAATGATTATTTTAAA
GGAAAAGAAATAGTGATTCATAAGGTATTTGGTGAAGGAATCATTGAAAATCAAGGGGAAAATTATGTAAAGATAGGATT
TTTAGATGGAACTAAAAGAAAATTTGATAGAAATGTTATAACTAAAAGTAATATTATTAAAAAGAAAAGTGTATCATAA

Upstream 100 bases:

>100_bases
ATAATTGTAATATATGGAATAATCTTTAAAATTGAATATTGGGTTATAACATTTACAACATTTTACCAAGTACATCTACA
GAAATACATGGGTTAAGGGC

Downstream 100 bases:

>100_bases
AAAATCTATTTTAGTAACAAATAAACTTCTATTCTAAATATATAAGTAGCAAATTTTATATTACACACATAATAATATAA
GGAAAACCTGATAAAATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-Dependent DNA Helicase; Superfamily I DNA Helicase; ATP-Dependent Helicase; ATP-Dependent DNA Helicase PcrA; DNA Helicase II

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MEFKNIVIVNCNEGNIPYSKADEEVNIEEERRLFYVGITRAKENLYLTVPKVIRGKNKENSNFIKECKLDKELLENDYFK
GKEIVIHKVFGEGIIENQGENYVKIGFLDGTKRKFDRNVITKSNIIKKKSVS

Sequences:

>Translated_132_residues
MEFKNIVIVNCNEGNIPYSKADEEVNIEEERRLFYVGITRAKENLYLTVPKVIRGKNKENSNFIKECKLDKELLENDYFK
GKEIVIHKVFGEGIIENQGENYVKIGFLDGTKRKFDRNVITKSNIIKKKSVS
>Mature_132_residues
MEFKNIVIVNCNEGNIPYSKADEEVNIEEERRLFYVGITRAKENLYLTVPKVIRGKNKENSNFIKECKLDKELLENDYFK
GKEIVIHKVFGEGIIENQGENYVKIGFLDGTKRKFDRNVITKSNIIKKKSVS

Specific function: Has Both Atpase And Helicase Activities. Unwinds DNA Duplexes With 3' To 5' Polarity With Respect To The Bound Strand And Initiates Unwinding Most Effectively When A Single-Stranded Region Is Present. Involved In The Post-Incision Events Of Nucleotide Exc

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 3000 [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 15348; Mature: 15348

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKNIVIVNCNEGNIPYSKADEEVNIEEERRLFYVGITRAKENLYLTVPKVIRGKNKEN
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECHHHCCCCCCC
SNFIKECKLDKELLENDYFKGKEIVIHKVFGEGIIENQGENYVKIGFLDGTKRKFDRNVI
CCHHHHHHCCHHHHHCCCCCCCEEEEEEECCCCEECCCCCCEEEEEEECCCCHHHCCCCC
TKSNIIKKKSVS
CCCCCEECCCCC
>Mature Secondary Structure
MEFKNIVIVNCNEGNIPYSKADEEVNIEEERRLFYVGITRAKENLYLTVPKVIRGKNKEN
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECHHHCCCCCCC
SNFIKECKLDKELLENDYFKGKEIVIHKVFGEGIIENQGENYVKIGFLDGTKRKFDRNVI
CCHHHHHHCCHHHHHCCCCCCCEEEEEEECCCCEECCCCCCEEEEEEECCCCHHHCCCCC
TKSNIIKKKSVS
CCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: Hydrolase; In phosphorus-containing anhydrides [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA