Click here to switch to the map view.

The map label for this gene is pcaC-2

Identifier: 153936784

GI number: 153936784

Start: 2043496

End: 2043828

Strand: Direct

Name: pcaC-2

Synonym: CLC_1927

Alternate gene names: NA

Gene position: 2043496-2043828 (Clockwise)

Preceding gene: 153935355

Following gene: 153936014

Centisome position: 54.34

GC content: 33.63

Gene sequence:

>333_bases
ATGGATACTTATTATGATCCCCAAAATCTTGCAAAGTTCGGAACAATTGGAGAGGATGCACCTGAATTATGGGACAAATT
TCTTGAATATTATGGTGAAGTTTTTAAAGAAGGTAATTTAACTACTCGTGAAAAAGCAATTATAGCTTTAGCAGTAGCAC
ATGCATTACAATGTCCCTATTGTATTGATTCTTATACTCAAACTTGTTTAGAACAGGGTGTAAATAAAGAACAGATGATG
GAAGCAATTCATGTAGCTGCTGCAATTCGTGGAGGTGCTACTTTAGTTCATGGTGTTCAAATGAAAAATGTAGCAAATAA
ACTAGAACTTTAA

Upstream 100 bases:

>100_bases
TTGTGATTATATACTAAAAATTAGCATGACTTTGTAGTTATGTAGATAAATATATCTGTATACATAAAGTATTTTTTAAA
ATTTAAGGGAGGATATAGAA

Downstream 100 bases:

>100_bases
AAGGAGCAATATATGAATAATAAAAGTTATTTAGAAGAATTAGATTGTATTCCTAGCTTTAAAAGCAGAGTAACTAATAA
AGATTTTTGTAAAACTAATA

Product: 4-carboxymuconolactone decarboxylase

Products: 4,5-dihydro-5-oxofuran-2-acetate; CO2

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MDTYYDPQNLAKFGTIGEDAPELWDKFLEYYGEVFKEGNLTTREKAIIALAVAHALQCPYCIDSYTQTCLEQGVNKEQMM
EAIHVAAAIRGGATLVHGVQMKNVANKLEL

Sequences:

>Translated_110_residues
MDTYYDPQNLAKFGTIGEDAPELWDKFLEYYGEVFKEGNLTTREKAIIALAVAHALQCPYCIDSYTQTCLEQGVNKEQMM
EAIHVAAAIRGGATLVHGVQMKNVANKLEL
>Mature_110_residues
MDTYYDPQNLAKFGTIGEDAPELWDKFLEYYGEVFKEGNLTTREKAIIALAVAHALQCPYCIDSYTQTCLEQGVNKEQMM
EAIHVAAAIRGGATLVHGVQMKNVANKLEL

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: 4.1.1.44

Molecular weight: Translated: 12257; Mature: 12257

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTYYDPQNLAKFGTIGEDAPELWDKFLEYYGEVFKEGNLTTREKAIIALAVAHALQCPY
CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH
CIDSYTQTCLEQGVNKEQMMEAIHVAAAIRGGATLVHGVQMKNVANKLEL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTYYDPQNLAKFGTIGEDAPELWDKFLEYYGEVFKEGNLTTREKAIIALAVAHALQCPY
CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH
CIDSYTQTCLEQGVNKEQMMEAIHVAAAIRGGATLVHGVQMKNVANKLEL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate

Specific reaction: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 4,5-dihydro-5-oxofuran-2-acetate + CO2

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA