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The map label for this gene is 153936640

Identifier: 153936640

GI number: 153936640

Start: 2243443

End: 2244336

Strand: Reverse

Name: 153936640

Synonym: CLC_2113

Alternate gene names: NA

Gene position: 2244336-2243443 (Counterclockwise)

Preceding gene: 153935378

Following gene: 153937745

Centisome position: 59.68

GC content: 25.17

Gene sequence:

>894_bases
ATGATTGGAAACATAGGGTATTTATATTATAAAGAATATTTTAAAGATGAATATATACATGAGTGCAAGATACAAAGTAA
AAAGTATGATGAAAAAAACAATCCATTAATAAAAATCAATCAAAAAATATTGGACAATAGTAATATAGACATTTTGAAAA
ATAATAAATTTAAATTTATAAAAGAAATTCAAGATAAATTATACAAGAAAAGAATTTATTTTAAGACTACATATCCAGGA
CTTATAGTAGGCACAGGATATAGCCATATATTAAAAGAAAAAGAAGAGTTTAAATTGAGTTTAGAGTTTGATTATACAAC
AGGACTTCCAGTTATAAATGGATCATCAATTAAAGGAATGCTTAGAAGTGTTTTTTATAATAAAAAAGATGATGAAAAGC
TAATTGAGGAGAAAGAAAAATATATAAGAGATATTTTAAAAGAATTAATAAAGAAAGAAAATCCTAAATTTAATGGAGAA
TTTGATTTTGAGGAATTAACCAATAATATATTTGAAGGTAAATGCAAGGCAAAAGATAAAAATGGCATCCATATGTCAAT
AAGTGAAAGAGATATATTTTTAGGAGCAACAATTGATATAGAGGCAACAATAGAAGAGATGAAGAGAACTAAGCAGGAAA
AAAATAATTTGCTTGGAGAAGATTATGTAACTCCACATGGTGAAGGAAAAGATAAATTAAAAAATCCTAATCCAATTAAG
TTTTTAAAGGTGATGCCTAATGTAGTTTGGTGTTTTGGATTTGATCTCAAAGATTTTAATAAAGATATACCAGCAGATAT
AAAAAAGAAACTATTCAAACAAATACTCTTAGACCTTGGAATTGGTGCTAAAACAAATGTAGGTTATGGTAGGCTTGAAT
TCATTAGTTATTAA

Upstream 100 bases:

>100_bases
AACAAACAGAAGAAGAAGTAATAAATGCAGCTATAGCTGTTAAATTAGCAATGAGAGTATTTAAGTTCACAGAAAATAGT
GAAAGTTAGGTGAGCGAGGT

Downstream 100 bases:

>100_bases
GGGTGACTATTATGGATATAAATAGTATAACAAATTCATTATTTATTGGAATGAAAATTCACAAACCAAAGAAGGAAACA
GAAATAATAAAGATTACAGA

Product: CRISPR-associated Cmr5 family protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Protein Cmr6 Family; CRISPR-Associated Ramp Protein; CRISPR-Associated RAMP Cmr6 Family Protein

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MIGNIGYLYYKEYFKDEYIHECKIQSKKYDEKNNPLIKINQKILDNSNIDILKNNKFKFIKEIQDKLYKKRIYFKTTYPG
LIVGTGYSHILKEKEEFKLSLEFDYTTGLPVINGSSIKGMLRSVFYNKKDDEKLIEEKEKYIRDILKELIKKENPKFNGE
FDFEELTNNIFEGKCKAKDKNGIHMSISERDIFLGATIDIEATIEEMKRTKQEKNNLLGEDYVTPHGEGKDKLKNPNPIK
FLKVMPNVVWCFGFDLKDFNKDIPADIKKKLFKQILLDLGIGAKTNVGYGRLEFISY

Sequences:

>Translated_297_residues
MIGNIGYLYYKEYFKDEYIHECKIQSKKYDEKNNPLIKINQKILDNSNIDILKNNKFKFIKEIQDKLYKKRIYFKTTYPG
LIVGTGYSHILKEKEEFKLSLEFDYTTGLPVINGSSIKGMLRSVFYNKKDDEKLIEEKEKYIRDILKELIKKENPKFNGE
FDFEELTNNIFEGKCKAKDKNGIHMSISERDIFLGATIDIEATIEEMKRTKQEKNNLLGEDYVTPHGEGKDKLKNPNPIK
FLKVMPNVVWCFGFDLKDFNKDIPADIKKKLFKQILLDLGIGAKTNVGYGRLEFISY
>Mature_297_residues
MIGNIGYLYYKEYFKDEYIHECKIQSKKYDEKNNPLIKINQKILDNSNIDILKNNKFKFIKEIQDKLYKKRIYFKTTYPG
LIVGTGYSHILKEKEEFKLSLEFDYTTGLPVINGSSIKGMLRSVFYNKKDDEKLIEEKEKYIRDILKELIKKENPKFNGE
FDFEELTNNIFEGKCKAKDKNGIHMSISERDIFLGATIDIEATIEEMKRTKQEKNNLLGEDYVTPHGEGKDKLKNPNPIK
FLKVMPNVVWCFGFDLKDFNKDIPADIKKKLFKQILLDLGIGAKTNVGYGRLEFISY

Specific function: Unknown

COG id: COG1604

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34830; Mature: 34830

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGNIGYLYYKEYFKDEYIHECKIQSKKYDEKNNPLIKINQKILDNSNIDILKNNKFKFI
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHCCCCCEEEECCCHHHH
KEIQDKLYKKRIYFKTTYPGLIVGTGYSHILKEKEEFKLSLEFDYTTGLPVINGSSIKGM
HHHHHHHHHHHEEEEECCCCEEEECCHHHHHCCCCCEEEEEEEECCCCCCEECCCHHHHH
LRSVFYNKKDDEKLIEEKEKYIRDILKELIKKENPKFNGEFDFEELTNNIFEGKCKAKDK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCC
NGIHMSISERDIFLGATIDIEATIEEMKRTKQEKNNLLGEDYVTPHGEGKDKLKNPNPIK
CCEEEEECCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHH
FLKVMPNVVWCFGFDLKDFNKDIPADIKKKLFKQILLDLGIGAKTNVGYGRLEFISY
HHHHHCCEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MIGNIGYLYYKEYFKDEYIHECKIQSKKYDEKNNPLIKINQKILDNSNIDILKNNKFKFI
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHCCCCCEEEECCCHHHH
KEIQDKLYKKRIYFKTTYPGLIVGTGYSHILKEKEEFKLSLEFDYTTGLPVINGSSIKGM
HHHHHHHHHHHEEEEECCCCEEEECCHHHHHCCCCCEEEEEEEECCCCCCEECCCHHHHH
LRSVFYNKKDDEKLIEEKEKYIRDILKELIKKENPKFNGEFDFEELTNNIFEGKCKAKDK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCC
NGIHMSISERDIFLGATIDIEATIEEMKRTKQEKNNLLGEDYVTPHGEGKDKLKNPNPIK
CCEEEEECCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHH
FLKVMPNVVWCFGFDLKDFNKDIPADIKKKLFKQILLDLGIGAKTNVGYGRLEFISY
HHHHHCCEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA