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The map label for this gene is yfbE [C]

Identifier: 153936615

GI number: 153936615

Start: 2122030

End: 2123169

Strand: Reverse

Name: yfbE [C]

Synonym: CLC_1997

Alternate gene names: 153936615

Gene position: 2123169-2122030 (Counterclockwise)

Preceding gene: 153934964

Following gene: 153935533

Centisome position: 56.46

GC content: 37.72

Gene sequence:

>1140_bases
ATGACAGCAGAACGTTTTACAAAGCCTTTCTATATAACACAACCTTTGCTGCCTGATATAAATCAAATGAACGAGATGAT
AAAAGAAATATGGGAAAGCAATCAGTTGAGCAATAATGGGAATATGGTAAAACAACTTGAAAGAGATCTGTCAAATTTTC
TCAATACGGATTACCTTTCAGTTTTTGCAAATGGAACGACTGCATTACAGTTAGCATGTAAGGTTTTAAGATTGTCAGGG
GAAGTGATAACCACTCCATTTACGTTTGCAGCAACAGTCCATTCGCTGCCTTGGAACAATATCAAACCGATCTTTTGTGA
CATTGAGGAAGATACATTCAATATAAATCCGGATCTTATCGAGTCATTAATAACACAAGATACTACTGCGATAATGCCTG
TTCATGTTTTCGGGACCCCTTGCAATGTTGAGAAAATCCAACGGATTGCAGACAAACATGGACTTAAGGTGTTGTATGAC
GCTGCACATGCCTTTGGGGTGGAAATTGACGGTAAGCCTATTTCATCTTTTGGCGATATATCAATGTTCAGTTTTCATGC
GACAAAAATATATCATACAATAGAGGGGGGAGCATTAACCTTCAAAGATGCATACTCAAAGGAAAGAGCAGATTCCCTAA
GGAATTTTGGGATACAAGGCATCGATAATATAACTGAACTCGGTACCAATGGGAAGCTCAACGAAGTACAGGCAGCCGTA
GGTATATTACTGCTCAAGATGGTTGAGGATGAAATTGAAAAAAGGAAAGAAATTACAAACCTTTATCGCAAATTGCTAGA
AAATATACCCGGAATTACCACCAGCAAGGACATTGAGGGTGTCAAATATAATTACCCTTATTTCGTTATAAGAGTGGATA
AAAAAGAATATGGTCTATCCCGGGATGAGCTTTATGAAGAATTGAAGAAATACAATGTAATTTCACGAAAGTACTTCTAT
CCACTCTGCAGCAATTTCCAGTGCTATAGAGACATTCCATCTGCATCAGTATCAAGGCTCCCGGTAGCAAATAAAATTGC
AGAAATGGTTCTTGCTCTCCCACTGCATGGAAGAATGCTCAATAGTGATGTAGAAAATATTTGTAGCATTATTCAAAGCA
TAAGATCAAGCATCCTATAA

Upstream 100 bases:

>100_bases
CAATAAAGAGTGGGCGTTGGAGAATTTCAAATTTTTTAATGATAATGCAAATTGATTAATAAAGTAGGAAAATTTTATAC
CGATTCAAGGAGGTGCAAAT

Downstream 100 bases:

>100_bases
TACCATTACCATAAAATTTAAAAAAAAGCCGGAAATGCAAATTGAATTCATTATGTGATAAATGTTAAATTTGAGCATAT
GGGGGCTAATTATGAAAGAT

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MTAERFTKPFYITQPLLPDINQMNEMIKEIWESNQLSNNGNMVKQLERDLSNFLNTDYLSVFANGTTALQLACKVLRLSG
EVITTPFTFAATVHSLPWNNIKPIFCDIEEDTFNINPDLIESLITQDTTAIMPVHVFGTPCNVEKIQRIADKHGLKVLYD
AAHAFGVEIDGKPISSFGDISMFSFHATKIYHTIEGGALTFKDAYSKERADSLRNFGIQGIDNITELGTNGKLNEVQAAV
GILLLKMVEDEIEKRKEITNLYRKLLENIPGITTSKDIEGVKYNYPYFVIRVDKKEYGLSRDELYEELKKYNVISRKYFY
PLCSNFQCYRDIPSASVSRLPVANKIAEMVLALPLHGRMLNSDVENICSIIQSIRSSIL

Sequences:

>Translated_379_residues
MTAERFTKPFYITQPLLPDINQMNEMIKEIWESNQLSNNGNMVKQLERDLSNFLNTDYLSVFANGTTALQLACKVLRLSG
EVITTPFTFAATVHSLPWNNIKPIFCDIEEDTFNINPDLIESLITQDTTAIMPVHVFGTPCNVEKIQRIADKHGLKVLYD
AAHAFGVEIDGKPISSFGDISMFSFHATKIYHTIEGGALTFKDAYSKERADSLRNFGIQGIDNITELGTNGKLNEVQAAV
GILLLKMVEDEIEKRKEITNLYRKLLENIPGITTSKDIEGVKYNYPYFVIRVDKKEYGLSRDELYEELKKYNVISRKYFY
PLCSNFQCYRDIPSASVSRLPVANKIAEMVLALPLHGRMLNSDVENICSIIQSIRSSIL
>Mature_378_residues
TAERFTKPFYITQPLLPDINQMNEMIKEIWESNQLSNNGNMVKQLERDLSNFLNTDYLSVFANGTTALQLACKVLRLSGE
VITTPFTFAATVHSLPWNNIKPIFCDIEEDTFNINPDLIESLITQDTTAIMPVHVFGTPCNVEKIQRIADKHGLKVLYDA
AHAFGVEIDGKPISSFGDISMFSFHATKIYHTIEGGALTFKDAYSKERADSLRNFGIQGIDNITELGTNGKLNEVQAAVG
ILLLKMVEDEIEKRKEITNLYRKLLENIPGITTSKDIEGVKYNYPYFVIRVDKKEYGLSRDELYEELKKYNVISRKYFYP
LCSNFQCYRDIPSASVSRLPVANKIAEMVLALPLHGRMLNSDVENICSIIQSIRSSIL

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=363, Percent_Identity=27.8236914600551, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI2367285, Length=308, Percent_Identity=26.9480519480519, Blast_Score=104, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42934; Mature: 42803

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAERFTKPFYITQPLLPDINQMNEMIKEIWESNQLSNNGNMVKQLERDLSNFLNTDYLS
CCCHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHH
VFANGTTALQLACKVLRLSGEVITTPFTFAATVHSLPWNNIKPIFCDIEEDTFNINPDLI
HHCCCHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHH
ESLITQDTTAIMPVHVFGTPCNVEKIQRIADKHGLKVLYDAAHAFGVEIDGKPISSFGDI
HHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEHHHHHHCEEECCCCCCCCCCC
SMFSFHATKIYHTIEGGALTFKDAYSKERADSLRNFGIQGIDNITELGTNGKLNEVQAAV
HHHEEHHHHEEEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHH
GILLLKMVEDEIEKRKEITNLYRKLLENIPGITTSKDIEGVKYNYPYFVIRVDKKEYGLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEECCHHHCCC
RDELYEELKKYNVISRKYFYPLCSNFQCYRDIPSASVSRLPVANKIAEMVLALPLHGRML
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHCCCHHHHHHHHHHHHCCCCHHH
NSDVENICSIIQSIRSSIL
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAERFTKPFYITQPLLPDINQMNEMIKEIWESNQLSNNGNMVKQLERDLSNFLNTDYLS
CCHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHH
VFANGTTALQLACKVLRLSGEVITTPFTFAATVHSLPWNNIKPIFCDIEEDTFNINPDLI
HHCCCHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHH
ESLITQDTTAIMPVHVFGTPCNVEKIQRIADKHGLKVLYDAAHAFGVEIDGKPISSFGDI
HHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEHHHHHHCEEECCCCCCCCCCC
SMFSFHATKIYHTIEGGALTFKDAYSKERADSLRNFGIQGIDNITELGTNGKLNEVQAAV
HHHEEHHHHEEEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHH
GILLLKMVEDEIEKRKEITNLYRKLLENIPGITTSKDIEGVKYNYPYFVIRVDKKEYGLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEECCHHHCCC
RDELYEELKKYNVISRKYFYPLCSNFQCYRDIPSASVSRLPVANKIAEMVLALPLHGRML
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHCCCHHHHHHHHHHHHCCCCHHH
NSDVENICSIIQSIRSSIL
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]