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The map label for this gene is ypgQ [H]

Identifier: 153936449

GI number: 153936449

Start: 641739

End: 642383

Strand: Direct

Name: ypgQ [H]

Synonym: CLC_0624

Alternate gene names: 153936449

Gene position: 641739-642383 (Clockwise)

Preceding gene: 153936878

Following gene: 153937108

Centisome position: 17.06

GC content: 28.37

Gene sequence:

>645_bases
ATGAATGAGGATTTATTAGAAAAAACATTGCTATATATTAAAGAGAGATTTGAAAATGATTATAGTGGGCATGATTATTA
TCACAGTATTAGAGTATATAAATTAGCTACTTCTATATGCAAAGAAGAAAATGGTGATTTAGAGATAGTTCAATTAGCTT
CTTTATTGCATGACGTTGATGATTATAAATTATTTGGTGGGAATGTAGGTGCTTATTCAAATGCAGAAACTTTTTTAAAG
GATAATAAAATATCAGATACAAAAATAAAGGTTATATGCGATATAATTTCCTCAATATCCTTTAAAGGTACAGGTACACA
AGTTCCTCAAAGTAAAGAAGGAAAAATAGTACAAGATGCGGATAGACTAGATGCAATTGGAGCTATTGGTATTGCGAGGA
CATTTGCATATGGAGGTAGTAAAGATAGGGTTTTACATATACCTAATGAAATACCACGTGATAATATGAATTTTGAAGAA
TATTCTACATCTAATGGAACTACTATTAATCATTTTTACGAAAAGCTTTTAAGGTTAAAATATTTGATGAATACGGATAC
TGCTAAAAAAATAGCTGAATCTAGACATGAATATATGGAGGATTTTTTAACAGAATTTTTAAATGAATGGGATGGAATAA
TATGA

Upstream 100 bases:

>100_bases
AAACACACTTCCTTTAAATGTAAGTGTGTTTGGGGGTTATATCTTTGATTATATTTAGTATAATCTTAGTATATATATTT
TATAGATCGGAGAAAGAGTT

Downstream 100 bases:

>100_bases
AGGATATTAAGTCACAATCTTCCTAAGCTATAAAGAAACAATAATAAAAGAAAGTTTATTAAGTGGACTTGCTTTTATTA
ATATAACAAATCTATTTTAA

Product: HD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNEDLLEKTLLYIKERFENDYSGHDYYHSIRVYKLATSICKEENGDLEIVQLASLLHDVDDYKLFGGNVGAYSNAETFLK
DNKISDTKIKVICDIISSISFKGTGTQVPQSKEGKIVQDADRLDAIGAIGIARTFAYGGSKDRVLHIPNEIPRDNMNFEE
YSTSNGTTINHFYEKLLRLKYLMNTDTAKKIAESRHEYMEDFLTEFLNEWDGII

Sequences:

>Translated_214_residues
MNEDLLEKTLLYIKERFENDYSGHDYYHSIRVYKLATSICKEENGDLEIVQLASLLHDVDDYKLFGGNVGAYSNAETFLK
DNKISDTKIKVICDIISSISFKGTGTQVPQSKEGKIVQDADRLDAIGAIGIARTFAYGGSKDRVLHIPNEIPRDNMNFEE
YSTSNGTTINHFYEKLLRLKYLMNTDTAKKIAESRHEYMEDFLTEFLNEWDGII
>Mature_214_residues
MNEDLLEKTLLYIKERFENDYSGHDYYHSIRVYKLATSICKEENGDLEIVQLASLLHDVDDYKLFGGNVGAYSNAETFLK
DNKISDTKIKVICDIISSISFKGTGTQVPQSKEGKIVQDADRLDAIGAIGIARTFAYGGSKDRVLHIPNEIPRDNMNFEE
YSTSNGTTINHFYEKLLRLKYLMNTDTAKKIAESRHEYMEDFLTEFLNEWDGII

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=213, Percent_Identity=26.2910798122066, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24473; Mature: 24473

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEDLLEKTLLYIKERFENDYSGHDYYHSIRVYKLATSICKEENGDLEIVQLASLLHDVD
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
DYKLFGGNVGAYSNAETFLKDNKISDTKIKVICDIISSISFKGTGTQVPQSKEGKIVQDA
CCEEECCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHH
DRLDAIGAIGIARTFAYGGSKDRVLHIPNEIPRDNMNFEEYSTSNGTTINHFYEKLLRLK
HHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHH
YLMNTDTAKKIAESRHEYMEDFLTEFLNEWDGII
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNEDLLEKTLLYIKERFENDYSGHDYYHSIRVYKLATSICKEENGDLEIVQLASLLHDVD
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
DYKLFGGNVGAYSNAETFLKDNKISDTKIKVICDIISSISFKGTGTQVPQSKEGKIVQDA
CCEEECCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHH
DRLDAIGAIGIARTFAYGGSKDRVLHIPNEIPRDNMNFEEYSTSNGTTINHFYEKLLRLK
HHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHH
YLMNTDTAKKIAESRHEYMEDFLTEFLNEWDGII
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]