Click here to switch to the map view.

The map label for this gene is 153936424

Identifier: 153936424

GI number: 153936424

Start: 607175

End: 607588

Strand: Direct

Name: 153936424

Synonym: CLC_0591

Alternate gene names: NA

Gene position: 607175-607588 (Clockwise)

Preceding gene: 153936724

Following gene: 153937514

Centisome position: 16.15

GC content: 24.15

Gene sequence:

>414_bases
ATGTTTGAATGGAAAAAATGTTATAGTTGTAACATAAGTAAAATTGATAATCAGCATAAAAGATTATTTGAATTAGCAGA
TGAAATTTATACTATAGTTTCAGTTAATGATGGATATGACCATTTTGATGAAATTATGGAAGCTATAAAAGCACTAAAGG
AATATACAGTATATCATTTTTCTTATGAAGAAGAGGTGATGAGAAAATATGAGTATAGTGATTTAGATAACCATAAAGTA
GAACATGATGCTTTTGTAAATAAAATTAAATCTATAAATGAAGAGGAAATAGATGAAAAGCAAAAAAACTTTTTAATGGA
TTTACTAGAGTTTATTGTTAATTGGATAGAAAATCATATATTAAAGTCGGACTTGAAGTATAAAGAATATTTAAATGGAT
TGGGAGTATATTAA

Upstream 100 bases:

>100_bases
AATAATAAAATAGCATTTAAAATACATATAATTAATGTAATATTTATTTTTAACAATTAATATATAAATTTTAAATATAC
TATTAAAGAGGGGGATATTA

Downstream 100 bases:

>100_bases
AAAAATTATATATTTTATATAAATATTAATTAAAATAACATATATATTTTTGTATATTAATAAATAAATGAAGAAAACAC
TATCAAAATTATAAAAATGA

Product: hemerythrin-like metal-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MFEWKKCYSCNISKIDNQHKRLFELADEIYTIVSVNDGYDHFDEIMEAIKALKEYTVYHFSYEEEVMRKYEYSDLDNHKV
EHDAFVNKIKSINEEEIDEKQKNFLMDLLEFIVNWIENHILKSDLKYKEYLNGLGVY

Sequences:

>Translated_137_residues
MFEWKKCYSCNISKIDNQHKRLFELADEIYTIVSVNDGYDHFDEIMEAIKALKEYTVYHFSYEEEVMRKYEYSDLDNHKV
EHDAFVNKIKSINEEEIDEKQKNFLMDLLEFIVNWIENHILKSDLKYKEYLNGLGVY
>Mature_137_residues
MFEWKKCYSCNISKIDNQHKRLFELADEIYTIVSVNDGYDHFDEIMEAIKALKEYTVYHFSYEEEVMRKYEYSDLDNHKV
EHDAFVNKIKSINEEEIDEKQKNFLMDLLEFIVNWIENHILKSDLKYKEYLNGLGVY

Specific function: Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms [H]

COG id: COG2703

COG function: function code P; Hemerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hemerythrin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012827
- InterPro:   IPR012312
- InterPro:   IPR016131 [H]

Pfam domain/function: PF01814 Hemerythrin [H]

EC number: NA

Molecular weight: Translated: 16655; Mature: 16655

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00550 HEMERYTHRINS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEWKKCYSCNISKIDNQHKRLFELADEIYTIVSVNDGYDHFDEIMEAIKALKEYTVYHF
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
SYEEEVMRKYEYSDLDNHKVEHDAFVNKIKSINEEEIDEKQKNFLMDLLEFIVNWIENHI
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKSDLKYKEYLNGLGVY
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFEWKKCYSCNISKIDNQHKRLFELADEIYTIVSVNDGYDHFDEIMEAIKALKEYTVYHF
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
SYEEEVMRKYEYSDLDNHKVEHDAFVNKIKSINEEEIDEKQKNFLMDLLEFIVNWIENHI
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKSDLKYKEYLNGLGVY
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]