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The map label for this gene is 153936419

Identifier: 153936419

GI number: 153936419

Start: 2092914

End: 2093069

Strand: Reverse

Name: 153936419

Synonym: CLC_1972

Alternate gene names: NA

Gene position: 2093069-2092914 (Counterclockwise)

Preceding gene: 153937735

Following gene: 153935470

Centisome position: 55.66

GC content: 28.85

Gene sequence:

>156_bases
ATGAAGCAGGAAGATTTAGCAAAGTTAGTAGGAGTAAGAAGAGAGACTATAGGACATTTAGAAAATGAAAAATATAATCC
ATCATTAAAATTAGCTATGGATATTGCTAAAGTTTTTGGAAAATCAGTAGAGGAAGTATTTCAATTTGTGGATTAA

Upstream 100 bases:

>100_bases
TAAAGAAGTGACGTATAAATTAATATCATTTCAAAGGATTACTTGCAAACTATATTTTAAATATTAAATATATTTCCTAA
TTTATAATATGTAATTAAAC

Downstream 100 bases:

>100_bases
GATGCAATTTCAAAACAAAGAAACAATAAGCTAAGGTACTAGAAATATTAAGTTAATGCCTTAGCTTATTTATTTTGTGT
AAATAAATTCACTTATAATT

Product: DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MKQEDLAKLVGVRRETIGHLENEKYNPSLKLAMDIAKVFGKSVEEVFQFVD

Sequences:

>Translated_51_residues
MKQEDLAKLVGVRRETIGHLENEKYNPSLKLAMDIAKVFGKSVEEVFQFVD
>Mature_51_residues
MKQEDLAKLVGVRRETIGHLENEKYNPSLKLAMDIAKVFGKSVEEVFQFVD

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5852; Mature: 5852

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQEDLAKLVGVRRETIGHLENEKYNPSLKLAMDIAKVFGKSVEEVFQFVD
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQEDLAKLVGVRRETIGHLENEKYNPSLKLAMDIAKVFGKSVEEVFQFVD
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA