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The map label for this gene is 153936375

Identifier: 153936375

GI number: 153936375

Start: 1482004

End: 1482588

Strand: Direct

Name: 153936375

Synonym: CLC_1424

Alternate gene names: NA

Gene position: 1482004-1482588 (Clockwise)

Preceding gene: 153937871

Following gene: 153934835

Centisome position: 39.41

GC content: 22.74

Gene sequence:

>585_bases
ATGAACAAATCTAAAAAAAATATTATAATAGGTGCTACTATATTAATTTTAATTACACTAGGGGGATTTGGAAGTTATAA
ATATATAAAGTATAAAGATTATAAAGCTCTATTAAATAAGGCAGAAGCTTATATGGAGATAGAAAATTATGATAAGGCTA
TAGAAAATTATGAAAAAACCTTAGATTATAAAAATAATAAGGATGTTCTAGATAAAATAAATTTAGCTAAAGAAATAAAA
GAATCTAAAGCAAATTATGAAAAGGCTATGGAGTCATATAATAAAAAAGATTATGTAGGTGCTTTAGAATTATTTAAAAA
AGTATCTAAAAGAGATAATAAAAGATTCAATTTAGCCCAAGATAAGATAAAGGAATGCATAAAGATTTATGTAAATGAAA
ATTTAGATAAAGCGAAAGCTTTAGCAAAGGATAAAAAATATAAAGAAGCCTATTCTTACTTAGATAAAGTATTATCTATA
GATAAAGAAAATATAGTGGCTAAAAATTTAAAAGATCAATATATAAAAGAAGAGAAAGAACTACAAGAAGAAATAAAAAA
GGCAGGAGAAGAAGAAAAAAAGTAG

Upstream 100 bases:

>100_bases
TCAATACATAGTAGAAATATTAAAGGAAATGAATAATTTTTAGTTACAAGATTATAAAAAGATGTTACAGAATTGTATGT
ATGGAAGGGAGAGTGCTGCT

Downstream 100 bases:

>100_bases
AAGAGGAGCAGAAAAAGCAAGCTGAAGAAGAGAAGAAAATAAAAGAGGAAAATAAAAATTTACAAGGACAAGTAACTACA
AAGAAGAAGGCAGAAGAAAT

Product: etratricopeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MNKSKKNIIIGATILILITLGGFGSYKYIKYKDYKALLNKAEAYMEIENYDKAIENYEKTLDYKNNKDVLDKINLAKEIK
ESKANYEKAMESYNKKDYVGALELFKKVSKRDNKRFNLAQDKIKECIKIYVNENLDKAKALAKDKKYKEAYSYLDKVLSI
DKENIVAKNLKDQYIKEEKELQEEIKKAGEEEKK

Sequences:

>Translated_194_residues
MNKSKKNIIIGATILILITLGGFGSYKYIKYKDYKALLNKAEAYMEIENYDKAIENYEKTLDYKNNKDVLDKINLAKEIK
ESKANYEKAMESYNKKDYVGALELFKKVSKRDNKRFNLAQDKIKECIKIYVNENLDKAKALAKDKKYKEAYSYLDKVLSI
DKENIVAKNLKDQYIKEEKELQEEIKKAGEEEKK
>Mature_194_residues
MNKSKKNIIIGATILILITLGGFGSYKYIKYKDYKALLNKAEAYMEIENYDKAIENYEKTLDYKNNKDVLDKINLAKEIK
ESKANYEKAMESYNKKDYVGALELFKKVSKRDNKRFNLAQDKIKECIKIYVNENLDKAKALAKDKKYKEAYSYLDKVLSI
DKENIVAKNLKDQYIKEEKELQEEIKKAGEEEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22758; Mature: 22758

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSKKNIIIGATILILITLGGFGSYKYIKYKDYKALLNKAEAYMEIENYDKAIENYEKT
CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDYKNNKDVLDKINLAKEIKESKANYEKAMESYNKKDYVGALELFKKVSKRDNKRFNLAQ
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHH
DKIKECIKIYVNENLDKAKALAKDKKYKEAYSYLDKVLSIDKENIVAKNLKDQYIKEEKE
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LQEEIKKAGEEEKK
HHHHHHHHCCCCCC
>Mature Secondary Structure
MNKSKKNIIIGATILILITLGGFGSYKYIKYKDYKALLNKAEAYMEIENYDKAIENYEKT
CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDYKNNKDVLDKINLAKEIKESKANYEKAMESYNKKDYVGALELFKKVSKRDNKRFNLAQ
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHH
DKIKECIKIYVNENLDKAKALAKDKKYKEAYSYLDKVLSIDKENIVAKNLKDQYIKEEKE
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LQEEIKKAGEEEKK
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA