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The map label for this gene is csoR [H]

Identifier: 153936265

GI number: 153936265

Start: 1388274

End: 1388540

Strand: Direct

Name: csoR [H]

Synonym: CLC_1341

Alternate gene names: 153936265

Gene position: 1388274-1388540 (Clockwise)

Preceding gene: 153937702

Following gene: 153935481

Centisome position: 36.92

GC content: 29.21

Gene sequence:

>267_bases
ATGAATGAAGAAAAAAAAGCAGCTCTCCAAGCTTTAAAAACTTCAAAAGGGCAGATAGAAGGAATAATAAAGATGATAGA
AGAGGGACGATATTGTATAGATATATCTAATCAAATGACAGCTGCTCAATCTTTATTAAAAAAAGCTAACATGCTTATTT
TAAAGCAGCATCTTAATCATTGTGTAAAACAAGCTTTTCTTCATGATAATGGAGAAGAAAAGGTAGATGAAATTATAGAT
ACATTAACTAAGTTGCTTGGTAAATAA

Upstream 100 bases:

>100_bases
GGGGTGGTTGAACAAGGTGAACTTATTTAAGTACAAAATTTTAAAAATAAATATAGTTTTTATTAAATATAAAGACTAAA
TTATATAAGGAGGAAGAATA

Downstream 100 bases:

>100_bases
TAAATTTTAAATATCAATTCAAAGGTGGTGTAAAAAATGAAGAAATTATCATTTAATATAGAAGGAATGACTTGTGCAGC
TTGTGCTAAAGCTGTGGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MNEEKKAALQALKTSKGQIEGIIKMIEEGRYCIDISNQMTAAQSLLKKANMLILKQHLNHCVKQAFLHDNGEEKVDEIID
TLTKLLGK

Sequences:

>Translated_88_residues
MNEEKKAALQALKTSKGQIEGIIKMIEEGRYCIDISNQMTAAQSLLKKANMLILKQHLNHCVKQAFLHDNGEEKVDEIID
TLTKLLGK
>Mature_88_residues
MNEEKKAALQALKTSKGQIEGIIKMIEEGRYCIDISNQMTAAQSLLKKANMLILKQHLNHCVKQAFLHDNGEEKVDEIID
TLTKLLGK

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. It is part of the cso operon involved in the cellular response to increasing concentrations of copper inside the bacterium, which can be highly toxic. In the presence of copper, CsoR fu

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 9908; Mature: 9908

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEEKKAALQALKTSKGQIEGIIKMIEEGRYCIDISNQMTAAQSLLKKANMLILKQHLNH
CCHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
CVKQAFLHDNGEEKVDEIIDTLTKLLGK
HHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNEEKKAALQALKTSKGQIEGIIKMIEEGRYCIDISNQMTAAQSLLKKANMLILKQHLNH
CCHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
CVKQAFLHDNGEEKVDEIIDTLTKLLGK
HHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA