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The map label for this gene is 153936252

Identifier: 153936252

GI number: 153936252

Start: 540341

End: 541117

Strand: Direct

Name: 153936252

Synonym: CLC_0532

Alternate gene names: NA

Gene position: 540341-541117 (Clockwise)

Preceding gene: 153937335

Following gene: 153935148

Centisome position: 14.37

GC content: 26.0

Gene sequence:

>777_bases
ATGGATATAAAAAACATATGCCAAAATTTATATGCTACATTAAATTTAGAGAGAAAAATGGTAGGGATTAAATTTATATT
TACAAAAGAGCATTTTGAAAAATTAGACATTCCTAAATTAAATAGCAAAGTGAATTATTGCTACATGGTTAAAATGGCTT
CAAATGGAAGAGAATTTAAAGCTAATGAAGAAAATTTTAATTGTTTAGCTTCTGCGAGAGCTTTAGGTATAATTTCTAGC
AATAATTATGTAGACTCAGGACAACATTATGGAAAACACGGTTTATATGATAGCTTAGCTACGGCTAAAAAGGTACAAAA
AGATATTACATTTATAAATCACTTAATATATGGTATAGAAATTAGGCCTTTAGAAAACTTTATAAAAGAGCCAGATGTAG
TTGTTATTATAACTAATCCATATAATGTAATGCGAATAGTTCAGGCATATACTTATAAATATGGAGTACATAAAAATATA
ACTTTAGGTGGGAATCAAGGAATATGTTCTGAATGTACAGCTGTTCCTTATGAAAATAATGATCTTAATATATCAACCTT
GTGCTCTGGAACAAGATTTTTTTGTAAATGGGATGAATGTGATATGGGAGTGGGATTTCCATTTAATAAGTTTAAAGACA
TTGAAAATGGAATATTAAAAACATTAAATCCAACAGAGCAAAATTATAAGAAAAAAGAGATAGAATCAAAGTGTAAAAAT
ATAGAGAGTAATATTGATATAAAGTATAATGAAAATTATTTTGTTAATTATAAATAA

Upstream 100 bases:

>100_bases
ATAGTATTAGAGGGTAGTACAGAAGAGTTGATTAAAAGCAATTTTATTAAAAAAATTTATCTTGGAAGATAGAGTTCATA
TAAAAAGAGAGGGTAACTTT

Downstream 100 bases:

>100_bases
TGCTAGAATTAAACTTAAAAAATAAATTTTCATTATATTAGCTTTATTTTAAAATTTTTATTAAAGAATTAGTATTGCAT
AATATAAAGCACTATGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MDIKNICQNLYATLNLERKMVGIKFIFTKEHFEKLDIPKLNSKVNYCYMVKMASNGREFKANEENFNCLASARALGIISS
NNYVDSGQHYGKHGLYDSLATAKKVQKDITFINHLIYGIEIRPLENFIKEPDVVVIITNPYNVMRIVQAYTYKYGVHKNI
TLGGNQGICSECTAVPYENNDLNISTLCSGTRFFCKWDECDMGVGFPFNKFKDIENGILKTLNPTEQNYKKKEIESKCKN
IESNIDIKYNENYFVNYK

Sequences:

>Translated_258_residues
MDIKNICQNLYATLNLERKMVGIKFIFTKEHFEKLDIPKLNSKVNYCYMVKMASNGREFKANEENFNCLASARALGIISS
NNYVDSGQHYGKHGLYDSLATAKKVQKDITFINHLIYGIEIRPLENFIKEPDVVVIITNPYNVMRIVQAYTYKYGVHKNI
TLGGNQGICSECTAVPYENNDLNISTLCSGTRFFCKWDECDMGVGFPFNKFKDIENGILKTLNPTEQNYKKKEIESKCKN
IESNIDIKYNENYFVNYK
>Mature_258_residues
MDIKNICQNLYATLNLERKMVGIKFIFTKEHFEKLDIPKLNSKVNYCYMVKMASNGREFKANEENFNCLASARALGIISS
NNYVDSGQHYGKHGLYDSLATAKKVQKDITFINHLIYGIEIRPLENFIKEPDVVVIITNPYNVMRIVQAYTYKYGVHKNI
TLGGNQGICSECTAVPYENNDLNISTLCSGTRFFCKWDECDMGVGFPFNKFKDIENGILKTLNPTEQNYKKKEIESKCKN
IESNIDIKYNENYFVNYK

Specific function: Unknown

COG id: COG2043

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003748 [H]

Pfam domain/function: PF02596 DUF169 [H]

EC number: NA

Molecular weight: Translated: 29727; Mature: 29727

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKNICQNLYATLNLERKMVGIKFIFTKEHFEKLDIPKLNSKVNYCYMVKMASNGREFK
CCHHHHHHHHHHHHCCCEEEEEEEEEEEHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEC
ANEENFNCLASARALGIISSNNYVDSGQHYGKHGLYDSLATAKKVQKDITFINHLIYGIE
CCCCCCHHEEHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE
IRPLENFIKEPDVVVIITNPYNVMRIVQAYTYKYGVHKNITLGGNQGICSECTAVPYENN
EEEHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCC
DLNISTLCSGTRFFCKWDECDMGVGFPFNKFKDIENGILKTLNPTEQNYKKKEIESKCKN
CCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
IESNIDIKYNENYFVNYK
CCCCEEEEECCCEEEEEC
>Mature Secondary Structure
MDIKNICQNLYATLNLERKMVGIKFIFTKEHFEKLDIPKLNSKVNYCYMVKMASNGREFK
CCHHHHHHHHHHHHCCCEEEEEEEEEEEHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEC
ANEENFNCLASARALGIISSNNYVDSGQHYGKHGLYDSLATAKKVQKDITFINHLIYGIE
CCCCCCHHEEHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE
IRPLENFIKEPDVVVIITNPYNVMRIVQAYTYKYGVHKNITLGGNQGICSECTAVPYENN
EEEHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCC
DLNISTLCSGTRFFCKWDECDMGVGFPFNKFKDIENGILKTLNPTEQNYKKKEIESKCKN
CCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
IESNIDIKYNENYFVNYK
CCCCEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]