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The map label for this gene is 153936116

Identifier: 153936116

GI number: 153936116

Start: 1463214

End: 1464053

Strand: Direct

Name: 153936116

Synonym: CLC_1404

Alternate gene names: NA

Gene position: 1463214-1464053 (Clockwise)

Preceding gene: 153934772

Following gene: 153935138

Centisome position: 38.91

GC content: 29.05

Gene sequence:

>840_bases
ATGGGAATAGTTAAACTTATGGAAGAAAACAAAGAGGATTATGATATTTCTTTATTTGATGCTCCAGATCAAATAGTTTC
TAAAGTAGTAAGTGGAGAAGTAGATGCAGCGGCAGTTCCATCTAATTTGGCTTCTGTTTTATATAATAAAACAAAGGGGC
AAGTTCAATTAGTAGGAGTAAACACTTTAGGGGTCTTATATATTGTAGAAAACGGAGATACTATAAAAAATATAAAAGAT
CTAAAGGGTGAAACTATTTATGCTACAGGAAAGGGGGCTACTCCAGAATTTATTTTGAATTATATATTAAAGAAGAATGG
ATTGGATCCAGATAAGGATGTAAAAATAGAATATAAAGCTCAACATAATGATTTAGCAACTTTAGTAGCTTCAAAAAAAG
CAAAAATAGCAGTACTTCCAGAACCTTTTGTAACACTATCCAGAACTAAAAATAAGGATTTAAAAGTACAATTAGATTTA
ACAAAGGAATGGGAAAAAGTATCTGGAGAAGGGAAATTAACCATGGGAGCATTGGTATTTAAAAAGGATTTCATAGATAA
AAGAGGAGAAGATGTAGAAACTTTTATAAATAATTATAAAAAATCTGTAGAGTTTGTAAATAACAATAAGGAAGAAGCTA
GCAAACTTATGGAGAAAAACGGTATAGTATCAAAGGCAAAAATAGCACAGATGGCTATTCCAAAATGCAATATAGTATTT
ATGGATTCTAAAGATTATATGAATTCTCTAGAAAAATTTTATAATATTTTAAAAGAAAATGACCCAAAATCCATTGGAGG
AAAACTACCAGATGAAGATTTCTATTATAAGGAAAAATAA

Upstream 100 bases:

>100_bases
TTGCTCAAAAAAGGAGGAAAAGAAGGAAAGCACAAATACTACACAGGAAAGTAATAAAAAAGAAAAAATTAAAATAGCCA
CTTTAAAAGGACCTACTGGT

Downstream 100 bases:

>100_bases
AATAATTTCAAAATTAGTTAGAAGAACTTTAATAATAATATTCTGGGCATTTATATGGGAGCTTAGCTCCCTTTTTATAA
ATAACGAGATTTTACTTCCA

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MGIVKLMEENKEDYDISLFDAPDQIVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGVNTLGVLYIVENGDTIKNIKD
LKGETIYATGKGATPEFILNYILKKNGLDPDKDVKIEYKAQHNDLATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDL
TKEWEKVSGEGKLTMGALVFKKDFIDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAQMAIPKCNIVF
MDSKDYMNSLEKFYNILKENDPKSIGGKLPDEDFYYKEK

Sequences:

>Translated_279_residues
MGIVKLMEENKEDYDISLFDAPDQIVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGVNTLGVLYIVENGDTIKNIKD
LKGETIYATGKGATPEFILNYILKKNGLDPDKDVKIEYKAQHNDLATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDL
TKEWEKVSGEGKLTMGALVFKKDFIDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAQMAIPKCNIVF
MDSKDYMNSLEKFYNILKENDPKSIGGKLPDEDFYYKEK
>Mature_278_residues
GIVKLMEENKEDYDISLFDAPDQIVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGVNTLGVLYIVENGDTIKNIKDL
KGETIYATGKGATPEFILNYILKKNGLDPDKDVKIEYKAQHNDLATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDLT
KEWEKVSGEGKLTMGALVFKKDFIDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAQMAIPKCNIVFM
DSKDYMNSLEKFYNILKENDPKSIGGKLPDEDFYYKEK

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31235; Mature: 31104

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIVKLMEENKEDYDISLFDAPDQIVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGV
CCCHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCHHCHHHHHHHHHCCCCCEEEEEEE
NTLGVLYIVENGDTIKNIKDLKGETIYATGKGATPEFILNYILKKNGLDPDKDVKIEYKA
ECEEEEEEEECCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEC
QHNDLATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDLTKEWEKVSGEGKLTMGALVF
CCCHHHHHHHCCCCEEEECCCCCEEEECCCCCCEEEEEECCHHHHHHCCCCCEEHHHHHH
KKDFIDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAQMAIPKCNIVF
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEE
MDSKDYMNSLEKFYNILKENDPKSIGGKLPDEDFYYKEK
ECCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GIVKLMEENKEDYDISLFDAPDQIVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGV
CCHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCHHCHHHHHHHHHCCCCCEEEEEEE
NTLGVLYIVENGDTIKNIKDLKGETIYATGKGATPEFILNYILKKNGLDPDKDVKIEYKA
ECEEEEEEEECCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEC
QHNDLATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDLTKEWEKVSGEGKLTMGALVF
CCCHHHHHHHCCCCEEEECCCCCEEEECCCCCCEEEEEECCHHHHHHCCCCCEEHHHHHH
KKDFIDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAQMAIPKCNIVF
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEE
MDSKDYMNSLEKFYNILKENDPKSIGGKLPDEDFYYKEK
ECCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA