Definition Clostridium botulinum A str. Hall, complete genome.
Accession NC_009698
Length 3,760,560

Click here to switch to the map view.

The map label for this gene is 153936017

Identifier: 153936017

GI number: 153936017

Start: 1026550

End: 1027389

Strand: Direct

Name: 153936017

Synonym: CLC_1009

Alternate gene names: NA

Gene position: 1026550-1027389 (Clockwise)

Preceding gene: 153935693

Following gene: 153935290

Centisome position: 27.3

GC content: 25.24

Gene sequence:

>840_bases
ATGGAAGTTACAGCCAAATATCCAGGAAGTTTTGGGGAAATACTTCAAGGAAATTTAGGGGAAAAGCCTGTGTTGGTTTC
TTCCCCTATAAATTTATATACATGCGTTAGATTATTTGAAAGCAAAAAAGAAAAAAATTTCTATAAAAATATTAAAGCAA
ATAAATTTATAAAAAATATACTTACAGATTGGAAATATGAAGATTACATAAATACTATTCATATGGAAATAAATAGTAAA
ATCCCAAGGGGAAAAGGTTTAGCTAGTAGTACCGCAGATTTATGTGCTACTTATAAGTGTTTAATCCAATTATTTAAAAA
AAATTATTCCATAGAAGAATTACAAAAACATTGTTTAACCATAGAACCTACAGACAGCATAATATTTAATGAATTTATAT
TGTTTGATTATAAAAATGGAACTCTTAAAGAAAAACTGGGACCCTATATAAAATTTTATATATTAGTTTTTGAGGGAAAT
AGAATAATAAATACCTTAGATTTTAATAATAAAAATTTAAAAGAGATGAACTCAATAGAAGATCTGATACCGGATTTAAA
AGAAAGTATAGAAAAAAGAAATATTAAAAATATATCACGGATTTCAGAGGAAAGTATAAAAAGAAATTTTCATAGATTGA
CTTATGATTATTTTAATACAGTAGAAAAATATAAAAACCAAACTGGAGGATTGGGCATAATAGGATGCCATAGTGGTGAT
GCTTTAGGAATAGTATATGATAATAAAGAAGATTTACTGAAAGCAGAAAAAAATATTATAGATACAGGTAATTTAAAGAA
ATATACTCTAGAAACGGTTTTAAATGTTGAGGAGATATAA

Upstream 100 bases:

>100_bases
CTTTAAAGTTGATTTATATTTAAAGGGTCTAGGAGCAAATAGAGAATTTCAAAAAATATATAGAGATCATATAAAAGAAG
AAATCTAAGGAGAGTATTTC

Downstream 100 bases:

>100_bases
ATATATATTTATTTTAATACTGCAAATATAAAAAATATGCTTATAAACTAATTCGTTTCGCTAAAAAGTTCTAAATATAT
ATAGTTAGCAATAACAAGGG

Product: putative kinase

Products: NA

Alternate protein names: Kinase; Propanediol Utilization Protein PduX; PduX-Like Protein; Propanediol Utilization Kinase PduX; L-Threonine Kinase; PduX Protein; Cobalamin Biosynthesis Kinase; Ghmp Kinase

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MEVTAKYPGSFGEILQGNLGEKPVLVSSPINLYTCVRLFESKKEKNFYKNIKANKFIKNILTDWKYEDYINTIHMEINSK
IPRGKGLASSTADLCATYKCLIQLFKKNYSIEELQKHCLTIEPTDSIIFNEFILFDYKNGTLKEKLGPYIKFYILVFEGN
RIINTLDFNNKNLKEMNSIEDLIPDLKESIEKRNIKNISRISEESIKRNFHRLTYDYFNTVEKYKNQTGGLGIIGCHSGD
ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI

Sequences:

>Translated_279_residues
MEVTAKYPGSFGEILQGNLGEKPVLVSSPINLYTCVRLFESKKEKNFYKNIKANKFIKNILTDWKYEDYINTIHMEINSK
IPRGKGLASSTADLCATYKCLIQLFKKNYSIEELQKHCLTIEPTDSIIFNEFILFDYKNGTLKEKLGPYIKFYILVFEGN
RIINTLDFNNKNLKEMNSIEDLIPDLKESIEKRNIKNISRISEESIKRNFHRLTYDYFNTVEKYKNQTGGLGIIGCHSGD
ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI
>Mature_279_residues
MEVTAKYPGSFGEILQGNLGEKPVLVSSPINLYTCVRLFESKKEKNFYKNIKANKFIKNILTDWKYEDYINTIHMEINSK
IPRGKGLASSTADLCATYKCLIQLFKKNYSIEELQKHCLTIEPTDSIIFNEFILFDYKNGTLKEKLGPYIKFYILVFEGN
RIINTLDFNNKNLKEMNSIEDLIPDLKESIEKRNIKNISRISEESIKRNFHRLTYDYFNTVEKYKNQTGGLGIIGCHSGD
ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI

Specific function: Unknown

COG id: COG4542

COG function: function code Q; Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32246; Mature: 32246

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVTAKYPGSFGEILQGNLGEKPVLVSSPINLYTCVRLFESKKEKNFYKNIKANKFIKNI
CCCCCCCCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTDWKYEDYINTIHMEINSKIPRGKGLASSTADLCATYKCLIQLFKKNYSIEELQKHCLT
HHCCCHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEE
IEPTDSIIFNEFILFDYKNGTLKEKLGPYIKFYILVFEGNRIINTLDFNNKNLKEMNSIE
CCCCCHHHEEEEEEEECCCCCHHHHHCCEEEEEEEEEECCEEEEEEECCCCCHHHHHHHH
DLIPDLKESIEKRNIKNISRISEESIKRNFHRLTYDYFNTVEKYKNQTGGLGIIGCHSGD
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI
EEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MEVTAKYPGSFGEILQGNLGEKPVLVSSPINLYTCVRLFESKKEKNFYKNIKANKFIKNI
CCCCCCCCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTDWKYEDYINTIHMEINSKIPRGKGLASSTADLCATYKCLIQLFKKNYSIEELQKHCLT
HHCCCHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEE
IEPTDSIIFNEFILFDYKNGTLKEKLGPYIKFYILVFEGNRIINTLDFNNKNLKEMNSIE
CCCCCHHHEEEEEEEECCCCCHHHHHCCEEEEEEEEEECCEEEEEEECCCCCHHHHHHHH
DLIPDLKESIEKRNIKNISRISEESIKRNFHRLTYDYFNTVEKYKNQTGGLGIIGCHSGD
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI
EEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA