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The map label for this gene is tsr [C]

Identifier: 153935997

GI number: 153935997

Start: 431698

End: 433752

Strand: Reverse

Name: tsr [C]

Synonym: CLC_0436

Alternate gene names: 153935997

Gene position: 433752-431698 (Counterclockwise)

Preceding gene: 153935844

Following gene: 153936735

Centisome position: 11.53

GC content: 28.71

Gene sequence:

>2055_bases
ATGAAACTTAATTTTAAAAGTATTAAAAATTTAATTTTATGTACTATCTTACCACTAACTATATTATCTATGGTTTTTTT
ATCTATTTTAAGTTATAGTAATTCTAAAAACATAATTTCCAATGAGATAGAAGATAAGATGAAATTCCAGACTAAGGCTA
TAAGTGAAAATATAGAAAAATCACTATTAAGTCATAAAAAAATAGCTGAAACTCTTTCTAAAACTGTAGAATCTTCAAAG
GATATTATGCCTAGAGATACTTACAAAAATATAGTTGGAAATTTTATAAAGACTAATGATGAGACCTTTGGAACAGGTAT
ATGGTTCGAACCTTACAAATTTAATGCCAAAGAAAAGTTTTTTGGCCCTTATTGTTTTAAAGACGGTAACAAAATAGTTT
ACACCGATAAGTATAGTACCGAATCTTATAATTATATGAATTATGATTGGTATAAATCAGCTAAATCTTCTACTGCTTCA
TGTGTCTGGTCAAAACCTTATTTAGATGAACTTAGTAATATAACTATGGTATCAACTTCTGCTGCATTTAAGGATAAAAG
TGGTAATTTTCTTGGAGTGGCTACTGCTGATATAAACTTAGATCGTCTACAAAAAATGATAGCTAATGTGAAGTTTGGTA
AAACAGGTAATGCTATATTATTAGATAAAGACGGTAATTATATAACTAATCCTAACAAAAGTAAGATTATAAAGATGAAC
ATTACAAAAGAAGCTGAAAATAGTTTATCAACTATGGGAAAAGAAATGTTAGCTAATAAAAAAGGAACAGGTACATATAA
AGAAGGAGATGTGAAAAAATTAGTTTATTATGATTCTATACCTGAAACCGGTTGGATTATAGCTTTATCCATAGATCAAT
CAGAAGTTACTGCCCCTTTAAAACAACTTTTAATAAAAAGCATAGTGTTTATATTAATTGCTTTAGCTCTAATAATTATA
TTTATTCTATGGTTTAGCAATTACTTAACTAAAAATATAAACAGAGTTAACATATTTTCAGAAACTATCTCTAATGGAGA
TTTAACTAAATCATTATCCATAGATAGCAAAGATGAATTAGGAGCCATGGGTAAAAATTTAAATAGTATGAAAAACACCC
TAAATAATATAATAAATAATTTTAATATAAGCCTTAAAGATATAGTATCTATATCCGAAGAATTGTCTGCTAGTGCTGAA
CAAACCCAAAGTGCTTCAGATCAAATAGCACAATCTGTATCTGATATAGCAACCGGAAGTGAAGCTCAATCAAAAACTTC
TCAAGATTCTGTTAAAAATTTAGAAGAAATATATAAAGGCATGGAACAAATATCTGACAATGTTCAATCTGTTACTAACT
ACTCCATGGCAACTTATAAAAAGGCTGAAGAAGGTAATATAACGGTATCTACGGCTATAAATAAAATGAAAGATATAGAA
GAAAGCGTAATAGACTCTGCAAATATTGTAAATACACTAGAAGAAAAATCAAATAATATAGATAATATAGTTTCCCTAAT
AACATCTATTTCAGAGCAAACAAATTTATTAGCACTGAATGCAGCTATAGAGGCAGCCCGTGCAGGAGAAGCTGGTAAAG
GTTTTGCAGTGGTTGCAGAAGAGGTAAGAAAATTAGCTGAAGAATCTTCTGCCTCAGCTGGAAGTATTGGGGATATCATA
AAAGAAGTTCAAAGTGATATTACAAAGGTAGTTAACTCCATGAAGATTGAAACTAATAATGTTAATGAAGGAATAGTAAT
AGTACAAAATACTAAGAGCTCTTTTGAAAATATATTATCTAGTATTGACAAAGTCTCTAGAGAAATGCAAGATGTATCTG
CAGTAGTAGAAGAAATAACTGCTAGCACAGAAACTGTTGTAAATTCTTTAGAAAAAATAGACTCAATAATAAAAGAATCC
AGTAGTAATACACAAAATGTAGCAGCTTCTGCGGAAGAACAAACAGCCATAATGAAAGAAGTAGCTGAAGTTGCAACTAA
GCTCTCTCAAATGTCTTTAAAACTTGAAAAGGATATAAATATATTTAAAATATAA

Upstream 100 bases:

>100_bases
ATTATATCTATAGTACAATTAACCATATATAATAATAATTAACTATTTATAATAATTATTACCCTTATTACAATATAATT
TTTACACAAGGAGATTTGAA

Downstream 100 bases:

>100_bases
ATCTTTAAAGATAATTTACTTTAAAAAATGTATTAAATTAAAAAAGTACTTTTAGGGAACATAAATATCTAAAAAATAAT
TAGTATACAGATGTTAGTAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 684; Mature: 684

Protein sequence:

>684_residues
MKLNFKSIKNLILCTILPLTILSMVFLSILSYSNSKNIISNEIEDKMKFQTKAISENIEKSLLSHKKIAETLSKTVESSK
DIMPRDTYKNIVGNFIKTNDETFGTGIWFEPYKFNAKEKFFGPYCFKDGNKIVYTDKYSTESYNYMNYDWYKSAKSSTAS
CVWSKPYLDELSNITMVSTSAAFKDKSGNFLGVATADINLDRLQKMIANVKFGKTGNAILLDKDGNYITNPNKSKIIKMN
ITKEAENSLSTMGKEMLANKKGTGTYKEGDVKKLVYYDSIPETGWIIALSIDQSEVTAPLKQLLIKSIVFILIALALIII
FILWFSNYLTKNINRVNIFSETISNGDLTKSLSIDSKDELGAMGKNLNSMKNTLNNIINNFNISLKDIVSISEELSASAE
QTQSASDQIAQSVSDIATGSEAQSKTSQDSVKNLEEIYKGMEQISDNVQSVTNYSMATYKKAEEGNITVSTAINKMKDIE
ESVIDSANIVNTLEEKSNNIDNIVSLITSISEQTNLLALNAAIEAARAGEAGKGFAVVAEEVRKLAEESSASAGSIGDII
KEVQSDITKVVNSMKIETNNVNEGIVIVQNTKSSFENILSSIDKVSREMQDVSAVVEEITASTETVVNSLEKIDSIIKES
SSNTQNVAASAEEQTAIMKEVAEVATKLSQMSLKLEKDINIFKI

Sequences:

>Translated_684_residues
MKLNFKSIKNLILCTILPLTILSMVFLSILSYSNSKNIISNEIEDKMKFQTKAISENIEKSLLSHKKIAETLSKTVESSK
DIMPRDTYKNIVGNFIKTNDETFGTGIWFEPYKFNAKEKFFGPYCFKDGNKIVYTDKYSTESYNYMNYDWYKSAKSSTAS
CVWSKPYLDELSNITMVSTSAAFKDKSGNFLGVATADINLDRLQKMIANVKFGKTGNAILLDKDGNYITNPNKSKIIKMN
ITKEAENSLSTMGKEMLANKKGTGTYKEGDVKKLVYYDSIPETGWIIALSIDQSEVTAPLKQLLIKSIVFILIALALIII
FILWFSNYLTKNINRVNIFSETISNGDLTKSLSIDSKDELGAMGKNLNSMKNTLNNIINNFNISLKDIVSISEELSASAE
QTQSASDQIAQSVSDIATGSEAQSKTSQDSVKNLEEIYKGMEQISDNVQSVTNYSMATYKKAEEGNITVSTAINKMKDIE
ESVIDSANIVNTLEEKSNNIDNIVSLITSISEQTNLLALNAAIEAARAGEAGKGFAVVAEEVRKLAEESSASAGSIGDII
KEVQSDITKVVNSMKIETNNVNEGIVIVQNTKSSFENILSSIDKVSREMQDVSAVVEEITASTETVVNSLEKIDSIIKES
SSNTQNVAASAEEQTAIMKEVAEVATKLSQMSLKLEKDINIFKI
>Mature_684_residues
MKLNFKSIKNLILCTILPLTILSMVFLSILSYSNSKNIISNEIEDKMKFQTKAISENIEKSLLSHKKIAETLSKTVESSK
DIMPRDTYKNIVGNFIKTNDETFGTGIWFEPYKFNAKEKFFGPYCFKDGNKIVYTDKYSTESYNYMNYDWYKSAKSSTAS
CVWSKPYLDELSNITMVSTSAAFKDKSGNFLGVATADINLDRLQKMIANVKFGKTGNAILLDKDGNYITNPNKSKIIKMN
ITKEAENSLSTMGKEMLANKKGTGTYKEGDVKKLVYYDSIPETGWIIALSIDQSEVTAPLKQLLIKSIVFILIALALIII
FILWFSNYLTKNINRVNIFSETISNGDLTKSLSIDSKDELGAMGKNLNSMKNTLNNIINNFNISLKDIVSISEELSASAE
QTQSASDQIAQSVSDIATGSEAQSKTSQDSVKNLEEIYKGMEQISDNVQSVTNYSMATYKKAEEGNITVSTAINKMKDIE
ESVIDSANIVNTLEEKSNNIDNIVSLITSISEQTNLLALNAAIEAARAGEAGKGFAVVAEEVRKLAEESSASAGSIGDII
KEVQSDITKVVNSMKIETNNVNEGIVIVQNTKSSFENILSSIDKVSREMQDVSAVVEEITASTETVVNSLEKIDSIIKES
SSNTQNVAASAEEQTAIMKEVAEVATKLSQMSLKLEKDINIFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=334, Percent_Identity=25.748502994012, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1788194, Length=359, Percent_Identity=27.2980501392758, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1787690, Length=358, Percent_Identity=26.2569832402235, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1788195, Length=300, Percent_Identity=25.3333333333333, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI1789453, Length=418, Percent_Identity=24.6411483253589, Blast_Score=96, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 75429; Mature: 75429

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNFKSIKNLILCTILPLTILSMVFLSILSYSNSKNIISNEIEDKMKFQTKAISENIEK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SLLSHKKIAETLSKTVESSKDIMPRDTYKNIVGNFIKTNDETFGTGIWFEPYKFNAKEKF
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHH
FGPYCFKDGNKIVYTDKYSTESYNYMNYDWYKSAKSSTASCVWSKPYLDELSNITMVSTS
CCCCEEECCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEECCHHHHHHCCCEEEECC
AAFKDKSGNFLGVATADINLDRLQKMIANVKFGKTGNAILLDKDGNYITNPNKSKIIKMN
HHHCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEE
ITKEAENSLSTMGKEMLANKKGTGTYKEGDVKKLVYYDSIPETGWIIALSIDQSEVTAPL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCHHHHHHHH
KQLLIKSIVFILIALALIIIFILWFSNYLTKNINRVNIFSETISNGDLTKSLSIDSKDEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCEECCCCCHHHH
GAMGKNLNSMKNTLNNIINNFNISLKDIVSISEELSASAEQTQSASDQIAQSVSDIATGS
HHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EAQSKTSQDSVKNLEEIYKGMEQISDNVQSVTNYSMATYKKAEEGNITVSTAINKMKDIE
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
ESVIDSANIVNTLEEKSNNIDNIVSLITSISEQTNLLALNAAIEAARAGEAGKGFAVVAE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCHHHHHH
EVRKLAEESSASAGSIGDIIKEVQSDITKVVNSMKIETNNVNEGIVIVQNTKSSFENILS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCHHHHHHHHH
SIDKVSREMQDVSAVVEEITASTETVVNSLEKIDSIIKESSSNTQNVAASAEEQTAIMKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHH
VAEVATKLSQMSLKLEKDINIFKI
HHHHHHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MKLNFKSIKNLILCTILPLTILSMVFLSILSYSNSKNIISNEIEDKMKFQTKAISENIEK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SLLSHKKIAETLSKTVESSKDIMPRDTYKNIVGNFIKTNDETFGTGIWFEPYKFNAKEKF
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHH
FGPYCFKDGNKIVYTDKYSTESYNYMNYDWYKSAKSSTASCVWSKPYLDELSNITMVSTS
CCCCEEECCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEECCHHHHHHCCCEEEECC
AAFKDKSGNFLGVATADINLDRLQKMIANVKFGKTGNAILLDKDGNYITNPNKSKIIKMN
HHHCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEE
ITKEAENSLSTMGKEMLANKKGTGTYKEGDVKKLVYYDSIPETGWIIALSIDQSEVTAPL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCHHHHHHHH
KQLLIKSIVFILIALALIIIFILWFSNYLTKNINRVNIFSETISNGDLTKSLSIDSKDEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCEECCCCCHHHH
GAMGKNLNSMKNTLNNIINNFNISLKDIVSISEELSASAEQTQSASDQIAQSVSDIATGS
HHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EAQSKTSQDSVKNLEEIYKGMEQISDNVQSVTNYSMATYKKAEEGNITVSTAINKMKDIE
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
ESVIDSANIVNTLEEKSNNIDNIVSLITSISEQTNLLALNAAIEAARAGEAGKGFAVVAE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCHHHHHH
EVRKLAEESSASAGSIGDIIKEVQSDITKVVNSMKIETNNVNEGIVIVQNTKSSFENILS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCHHHHHHHHH
SIDKVSREMQDVSAVVEEITASTETVVNSLEKIDSIIKESSSNTQNVAASAEEQTAIMKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHH
VAEVATKLSQMSLKLEKDINIFKI
HHHHHHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA