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The map label for this gene is cypC [H]

Identifier: 153935926

GI number: 153935926

Start: 1110989

End: 1112248

Strand: Direct

Name: cypC [H]

Synonym: CLC_1090

Alternate gene names: 153935926

Gene position: 1110989-1112248 (Clockwise)

Preceding gene: 153936711

Following gene: 153936824

Centisome position: 29.54

GC content: 36.11

Gene sequence:

>1260_bases
ATGTTAATAGAGGAACATATTCCAAAGGATAAAGGCATTGACAACACTTTCGCTTTGTTACAGGAGAGATATTTATTTAT
CAGAAACAGGGTCGACAGGTATCAGTCTAACTTGTTTGAAACTCACTTATTTGGACAAAAGGTAATATGCATGACTGGTG
AGGAAGCTGCAAAGTTATTTTACAATGAGGAACTGTTTCAACGAAATGGTGCAGCACCTAAACGGGTGCAAAAAACCTTA
TTTGGTGAAAATGCAATCCAAACTATGGATGATGAAGAACATATTCATAGAAAGCACCTTTTTATGTCATTGATGACTCC
ACTATCTCAAAAGATATTAGCTGAACTTGTAATGGAGAAATGGAAATCTTCTATTGATAAATGGGAGCATGACAAGGAGA
TTGTACTTTTTAATGAGGCAAAAGAAACTTTATGCCAGATATCATGTAAGTGGGCAGGAGTTCCATTACATAAATCAGAA
ATAAAAAATCGGGCAGAGGATTTTAATTTAATGGTTAATGCTTTAGGGGCAGTTGGACCACAGTATTGGAAAGGGAAAAT
GGCTAGATCCAGAGCGGAAAAGTGGATAAGTGGGATAATCCAAGATGTTCGTTCTAGTAGGCTGGACGCAGAAGAAAGTA
CACCACTATATGCTATGGCTTTTCATAGGGATCTTGATGGCAATCAAATGGATACTTCAATGGCAGCCATAGAACTTATT
AATGTACTGCGTCCTATTGTTGCTATTTCAACCTTCATTACCTTTGCAGCCTTAGGTCTATATGAACATCCAGAATGTAA
AGAAAAATTAATTTCAGGTGGCGACAGCTATGTTGAAATGTTTGCACAGGAAGTTCGACGATACTATCCTTTCGCTCCTT
TTCTTGGTGCAAGAGTGCGAAAGGATTTTATATTGAATGAATGTGAATTAAAGAAAGGAATGCTAGTGTTACTTGATATG
TATGGTACAAATCATGATTTACAGATATGGGAAAAGCCTAACGAATTCTATCCAGAGAGGTTTAAAGAATGGAAAGGAAG
CTTATTTGATTTTATCCCTCAAGGCGGAGGTGACCCTGTTAAGACACACCGTTGTCCAGGAGAGGGTATTACTATGGAAA
TTATGAAAGGAAGTTTAGATTTTCTTGTTAACAAGATTGAGTTTCAGGTTCCAAAGCAGGATTTAAGTTATAGTCTAATA
AAAATACCTACATTACCTAAAAGCGGATTTATTATGACTAATATTAAAAGAAAGTTTTAA

Upstream 100 bases:

>100_bases
TTGTTGAGGTACCTATTCTTATATATAAAAAAGATACATTTTATTAATGCATATAGTATACGTTAATTTTACAATAAGAA
AAGAAGGAGAAGATAAGTGT

Downstream 100 bases:

>100_bases
AGTGATAATAATTTAGGAGAAATTAATTTGGTATAAAAATAAATTGAAATAGTTATAGTAAGGTAGATAAGAAAAAAAGA
GAAGGATAATATTAAATTTA

Product: cytochrome P450

Products: NA

Alternate protein names: Cytochrome P450BsBeta; Fatty acid beta-hydroxylase [H]

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MLIEEHIPKDKGIDNTFALLQERYLFIRNRVDRYQSNLFETHLFGQKVICMTGEEAAKLFYNEELFQRNGAAPKRVQKTL
FGENAIQTMDDEEHIHRKHLFMSLMTPLSQKILAELVMEKWKSSIDKWEHDKEIVLFNEAKETLCQISCKWAGVPLHKSE
IKNRAEDFNLMVNALGAVGPQYWKGKMARSRAEKWISGIIQDVRSSRLDAEESTPLYAMAFHRDLDGNQMDTSMAAIELI
NVLRPIVAISTFITFAALGLYEHPECKEKLISGGDSYVEMFAQEVRRYYPFAPFLGARVRKDFILNECELKKGMLVLLDM
YGTNHDLQIWEKPNEFYPERFKEWKGSLFDFIPQGGGDPVKTHRCPGEGITMEIMKGSLDFLVNKIEFQVPKQDLSYSLI
KIPTLPKSGFIMTNIKRKF

Sequences:

>Translated_419_residues
MLIEEHIPKDKGIDNTFALLQERYLFIRNRVDRYQSNLFETHLFGQKVICMTGEEAAKLFYNEELFQRNGAAPKRVQKTL
FGENAIQTMDDEEHIHRKHLFMSLMTPLSQKILAELVMEKWKSSIDKWEHDKEIVLFNEAKETLCQISCKWAGVPLHKSE
IKNRAEDFNLMVNALGAVGPQYWKGKMARSRAEKWISGIIQDVRSSRLDAEESTPLYAMAFHRDLDGNQMDTSMAAIELI
NVLRPIVAISTFITFAALGLYEHPECKEKLISGGDSYVEMFAQEVRRYYPFAPFLGARVRKDFILNECELKKGMLVLLDM
YGTNHDLQIWEKPNEFYPERFKEWKGSLFDFIPQGGGDPVKTHRCPGEGITMEIMKGSLDFLVNKIEFQVPKQDLSYSLI
KIPTLPKSGFIMTNIKRKF
>Mature_419_residues
MLIEEHIPKDKGIDNTFALLQERYLFIRNRVDRYQSNLFETHLFGQKVICMTGEEAAKLFYNEELFQRNGAAPKRVQKTL
FGENAIQTMDDEEHIHRKHLFMSLMTPLSQKILAELVMEKWKSSIDKWEHDKEIVLFNEAKETLCQISCKWAGVPLHKSE
IKNRAEDFNLMVNALGAVGPQYWKGKMARSRAEKWISGIIQDVRSSRLDAEESTPLYAMAFHRDLDGNQMDTSMAAIELI
NVLRPIVAISTFITFAALGLYEHPECKEKLISGGDSYVEMFAQEVRRYYPFAPFLGARVRKDFILNECELKKGMLVLLDM
YGTNHDLQIWEKPNEFYPERFKEWKGSLFDFIPQGGGDPVKTHRCPGEGITMEIMKGSLDFLVNKIEFQVPKQDLSYSLI
KIPTLPKSGFIMTNIKRKF

Specific function: Catalyzes the alpha- and beta-hydroxylation of myristic acid in the presence of hydrogen peroxide [H]

COG id: COG2124

COG function: function code Q; Cytochrome P450

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome P450 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001128
- InterPro:   IPR002401 [H]

Pfam domain/function: PF00067 p450 [H]

EC number: NA

Molecular weight: Translated: 48484; Mature: 48484

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIEEHIPKDKGIDNTFALLQERYLFIRNRVDRYQSNLFETHLFGQKVICMTGEEAAKLF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH
YNEELFQRNGAAPKRVQKTLFGENAIQTMDDEEHIHRKHLFMSLMTPLSQKILAELVMEK
HHHHHHHCCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKSSIDKWEHDKEIVLFNEAKETLCQISCKWAGVPLHKSEIKNRAEDFNLMVNALGAVGP
HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCH
QYWKGKMARSRAEKWISGIIQDVRSSRLDAEESTPLYAMAFHRDLDGNQMDTSMAAIELI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
NVLRPIVAISTFITFAALGLYEHPECKEKLISGGDSYVEMFAQEVRRYYPFAPFLGARVR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
KDFILNECELKKGMLVLLDMYGTNHDLQIWEKPNEFYPERFKEWKGSLFDFIPQGGGDPV
HHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCCHHHHHHHHCHHHHHCCCCCCCCC
KTHRCPGEGITMEIMKGSLDFLVNKIEFQVPKQDLSYSLIKIPTLPKSGFIMTNIKRKF
CCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCHHHHCEEEEECCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MLIEEHIPKDKGIDNTFALLQERYLFIRNRVDRYQSNLFETHLFGQKVICMTGEEAAKLF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH
YNEELFQRNGAAPKRVQKTLFGENAIQTMDDEEHIHRKHLFMSLMTPLSQKILAELVMEK
HHHHHHHCCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKSSIDKWEHDKEIVLFNEAKETLCQISCKWAGVPLHKSEIKNRAEDFNLMVNALGAVGP
HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCH
QYWKGKMARSRAEKWISGIIQDVRSSRLDAEESTPLYAMAFHRDLDGNQMDTSMAAIELI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
NVLRPIVAISTFITFAALGLYEHPECKEKLISGGDSYVEMFAQEVRRYYPFAPFLGARVR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
KDFILNECELKKGMLVLLDMYGTNHDLQIWEKPNEFYPERFKEWKGSLFDFIPQGGGDPV
HHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCCHHHHHHHHCHHHHHCCCCCCCCC
KTHRCPGEGITMEIMKGSLDFLVNKIEFQVPKQDLSYSLIKIPTLPKSGFIMTNIKRKF
CCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCHHHHCEEEEECCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10529095; 9384377; 12519760 [H]