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The map label for this gene is yndE [H]

Identifier: 153935662

GI number: 153935662

Start: 2356311

End: 2357417

Strand: Reverse

Name: yndE [H]

Synonym: CLC_2228

Alternate gene names: 153935662

Gene position: 2357417-2356311 (Counterclockwise)

Preceding gene: 153937696

Following gene: 153936182

Centisome position: 62.69

GC content: 24.39

Gene sequence:

>1107_bases
ATGGAAAATAAAAGTAATAATGTGTTAACTACAAATCAAACTATGCTTATGATAGTGGGATCTATGATAGGAATAGGGAT
ATTATCTCTTCCAGCTAATTTAACTAAGATAGCTGAAAATGATGGGTGGATTGGAGTAATTATAGGAAGCTTATATCCTT
TTTATATGGTATTTTGTGCTATATTAATATTCAAAGATAATTCTTACCACAACACCAATATAGTGGAAATAAGCAAGAAC
TATTTTGGTAAAATTTTAGGTAGTGTATTTTCTTTTGTATTTGCTTTCCAATATTTTATTTATATAATTATTACCACTGC
TAATATAAGTAATTTATTAAGGGTTCATTTAGTTTTATTTTTAGAGCAATATAAATTAGCCATTCCAATACTATTAATTT
CAGTATATGCTGCTTCTAAAGGAATAAAATCTTTAGGTATAATAAATGAAATTATTTTTTATGCAGCTATCCCATTAATT
TTAATAACTTTTTTGGCAGTAAAGCAAGGCAATATTCTCAATATTCAACCTATATTAGGAACTCCAATTTCCTCTATTTT
AAAGGCTAGTATAGAGACTGTATATTCTTTTTTAGGTATAGAAATTATTTTTTTAATAGTTCCTTTAATGGAGGATAAAA
ATAAGATAAGGAGTTCCTTTTTAAAAAGTACATTAATTGTAGTTGTTGTATATATATGGCTAAGTTTCATATCCATATAT
TACTTGGGTCCAGATGTAACAAAAAATTTGTATTGGCCTACTTTATCCCTTGCAGAAACAATTTATGTACCTGGTATAAG
TAATTTTAAACTTGTGTTTATATTTTTGTGGAATAGTATAGTATTTCAAACTATAGCTAATCAGAGTTATTTTTTCTATT
ATTCACTGTCCAGCATGTTTAAAAAAATAAACTCTAATATCTTATATATCATAGTATTTATCTTTGCTACTATAATTGTT
AATAAGTTAGATAGTTTTATAACTCTTACAAAAATCAATAAATATATTAATGTATTTTATTTAACATTTAATCTAATTTT
TATAACAAGTATAACTATTATAAAAATTATAAAAAGCAGATGGAAAAGTCAACTAACTCACGAATAA

Upstream 100 bases:

>100_bases
AATAATATATAGAAATATAGTCTAGGTATAGATGTTGGATTAAAAGAATTTGCCATAATGAGCGATGGTAATTTATGAAA
AAATTTAGGGGAGAGCTATA

Downstream 100 bases:

>100_bases
ATATTTTTAAAAGAGTTATTGTTATTATAATTTTAAACATATATTATTTGTAATTTAGACCTATTATGTTTCTAATGATA
TTTTGATATGGCTAGAGAAA

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MENKSNNVLTTNQTMLMIVGSMIGIGILSLPANLTKIAENDGWIGVIIGSLYPFYMVFCAILIFKDNSYHNTNIVEISKN
YFGKILGSVFSFVFAFQYFIYIIITTANISNLLRVHLVLFLEQYKLAIPILLISVYAASKGIKSLGIINEIIFYAAIPLI
LITFLAVKQGNILNIQPILGTPISSILKASIETVYSFLGIEIIFLIVPLMEDKNKIRSSFLKSTLIVVVVYIWLSFISIY
YLGPDVTKNLYWPTLSLAETIYVPGISNFKLVFIFLWNSIVFQTIANQSYFFYYSLSSMFKKINSNILYIIVFIFATIIV
NKLDSFITLTKINKYINVFYLTFNLIFITSITIIKIIKSRWKSQLTHE

Sequences:

>Translated_368_residues
MENKSNNVLTTNQTMLMIVGSMIGIGILSLPANLTKIAENDGWIGVIIGSLYPFYMVFCAILIFKDNSYHNTNIVEISKN
YFGKILGSVFSFVFAFQYFIYIIITTANISNLLRVHLVLFLEQYKLAIPILLISVYAASKGIKSLGIINEIIFYAAIPLI
LITFLAVKQGNILNIQPILGTPISSILKASIETVYSFLGIEIIFLIVPLMEDKNKIRSSFLKSTLIVVVVYIWLSFISIY
YLGPDVTKNLYWPTLSLAETIYVPGISNFKLVFIFLWNSIVFQTIANQSYFFYYSLSSMFKKINSNILYIIVFIFATIIV
NKLDSFITLTKINKYINVFYLTFNLIFITSITIIKIIKSRWKSQLTHE
>Mature_368_residues
MENKSNNVLTTNQTMLMIVGSMIGIGILSLPANLTKIAENDGWIGVIIGSLYPFYMVFCAILIFKDNSYHNTNIVEISKN
YFGKILGSVFSFVFAFQYFIYIIITTANISNLLRVHLVLFLEQYKLAIPILLISVYAASKGIKSLGIINEIIFYAAIPLI
LITFLAVKQGNILNIQPILGTPISSILKASIETVYSFLGIEIIFLIVPLMEDKNKIRSSFLKSTLIVVVVYIWLSFISIY
YLGPDVTKNLYWPTLSLAETIYVPGISNFKLVFIFLWNSIVFQTIANQSYFFYYSLSSMFKKINSNILYIIVFIFATIIV
NKLDSFITLTKINKYINVFYLTFNLIFITSITIIKIIKSRWKSQLTHE

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41944; Mature: 41944

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKSNNVLTTNQTMLMIVGSMIGIGILSLPANLTKIAENDGWIGVIIGSLYPFYMVFCA
CCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHH
ILIFKDNSYHNTNIVEISKNYFGKILGSVFSFVFAFQYFIYIIITTANISNLLRVHLVLF
HHHEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LEQYKLAIPILLISVYAASKGIKSLGIINEIIFYAAIPLILITFLAVKQGNILNIQPILG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
TPISSILKASIETVYSFLGIEIIFLIVPLMEDKNKIRSSFLKSTLIVVVVYIWLSFISIY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGPDVTKNLYWPTLSLAETIYVPGISNFKLVFIFLWNSIVFQTIANQSYFFYYSLSSMF
HCCCCHHCCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHH
KKINSNILYIIVFIFATIIVNKLDSFITLTKINKYINVFYLTFNLIFITSITIIKIIKSR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKSQLTHE
HHHHCCCC
>Mature Secondary Structure
MENKSNNVLTTNQTMLMIVGSMIGIGILSLPANLTKIAENDGWIGVIIGSLYPFYMVFCA
CCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHH
ILIFKDNSYHNTNIVEISKNYFGKILGSVFSFVFAFQYFIYIIITTANISNLLRVHLVLF
HHHEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LEQYKLAIPILLISVYAASKGIKSLGIINEIIFYAAIPLILITFLAVKQGNILNIQPILG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
TPISSILKASIETVYSFLGIEIIFLIVPLMEDKNKIRSSFLKSTLIVVVVYIWLSFISIY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGPDVTKNLYWPTLSLAETIYVPGISNFKLVFIFLWNSIVFQTIANQSYFFYYSLSSMF
HCCCCHHCCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHH
KKINSNILYIIVFIFATIIVNKLDSFITLTKINKYINVFYLTFNLIFITSITIIKIIKSR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKSQLTHE
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]