Click here to switch to the map view.

The map label for this gene is 153935660

Identifier: 153935660

GI number: 153935660

Start: 2127926

End: 2128078

Strand: Reverse

Name: 153935660

Synonym: CLC_2003

Alternate gene names: NA

Gene position: 2128078-2127926 (Counterclockwise)

Preceding gene: 153935469

Following gene: 153934964

Centisome position: 56.59

GC content: 28.1

Gene sequence:

>153_bases
GTGAGTGAAAGGGAGACAAGATTAAAAAATTTAAAGGGAGTGGAGGTTCAAAAATTAAAATCAAACAAAAGAAGCAAGGA
AGATTCCTTATATAATAGCACAATAGCTACTTTGGTTAGAAAAAAAATATATATCGCTGAATTAGATTATTAA

Upstream 100 bases:

>100_bases
TTTTTGATTAATAGTTGATTCATTTTGATATTTAGTTATTTCAAATTTACTTATTTTTTCATTTAGTTCGAAAGAATTTA
CATACGATTTAAATATATTA

Downstream 100 bases:

>100_bases
TTGGAAGTATTTATGGAATATTATAAGTGAATATAGTATAATTATGGATGTATTTTATATTTGAAATAGGGGGGGGGATT
GAGTTGTTCTTTTATGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 50; Mature: 49

Protein sequence:

>50_residues
MSERETRLKNLKGVEVQKLKSNKRSKEDSLYNSTIATLVRKKIYIAELDY

Sequences:

>Translated_50_residues
MSERETRLKNLKGVEVQKLKSNKRSKEDSLYNSTIATLVRKKIYIAELDY
>Mature_49_residues
SERETRLKNLKGVEVQKLKSNKRSKEDSLYNSTIATLVRKKIYIAELDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5889; Mature: 5758

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERETRLKNLKGVEVQKLKSNKRSKEDSLYNSTIATLVRKKIYIAELDY
CCCHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCC
>Mature Secondary Structure 
SERETRLKNLKGVEVQKLKSNKRSKEDSLYNSTIATLVRKKIYIAELDY
CCHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA