Click here to switch to the map view.

The map label for this gene is 153935629

Identifier: 153935629

GI number: 153935629

Start: 3406122

End: 3406745

Strand: Direct

Name: 153935629

Synonym: CLC_3256

Alternate gene names: NA

Gene position: 3406122-3406745 (Clockwise)

Preceding gene: 153936598

Following gene: 153936607

Centisome position: 90.57

GC content: 25.0

Gene sequence:

>624_bases
ATGAAAAATTACGCTAAAGTAATAGTTGAAGGATCACCTATATCTAAATCTAATTTTAAGTTATTTAATTTGCAAGGACG
AGCTATAATGCCCTTAAATTCAGGCAAATATCACGATAGATATGCAGTATATGAAGAAAAAATAGCTTATGAGGCAAGAC
TTCAAAATCCTAACACAGTATTGGGAGAATCATTAATTGCAGTATTAAAAGTCTATTATAAAAGCGAAAAAAGACATCCT
GATACAAATAATATAACTAAAAGCATATTTGATGGAATAGAAAAAAGCGGTATTATAATAAATGATGCTCAGATAAGAAG
ATTAATAATCGAAGAATTTTATGATAAAGAATTTCCACGGTTTGAATTAGAATTATTTGCAGAAAGTATTTTTAAAATGG
ACTATACTATTATAAAGAAAGAAAATACAGATAAGCCAATAAATTATTCTCCGCCTCCAAATAAAAAGGTTAAATTTAAT
AAAAATAAAGATAAATCTATGTTAGTAGCAAAAGATAAAATGGTATGTGAAATATGTGGTAAATCTATAAATAAAAATGA
TATTGTAACAGCAAATAAACAAACGGTAATAATATGTAAAAAATGTCTAACAAAATTATTTTAA

Upstream 100 bases:

>100_bases
AATTAATAAGTTACAGTTCAAATAAAATCCAATTTATTAAGTCTAAATTTTTAATCGAATATGATATAATGAAATACAGA
ATAGTAAAAGGAGCTTAAAT

Downstream 100 bases:

>100_bases
CAGGCTATGTAGTCAGATTTGTCTAAAAACAGATTCCTTTATATAATCCTATTAAGAAAATATAAATTTTAATACGCTAC
ATAAAAAGAGGCTATCTCAA

Product: endodeoxyribonuclease RusA family protein

Products: NA

Alternate protein names: Endodeoxyribonuclease RusA Family Protein; Endodeoxyribonuclease; Endonuclease; Zn-Finger Containing Protein; Crossover Junction Endodeoxyribonuclease RusA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKNYAKVIVEGSPISKSNFKLFNLQGRAIMPLNSGKYHDRYAVYEEKIAYEARLQNPNTVLGESLIAVLKVYYKSEKRHP
DTNNITKSIFDGIEKSGIIINDAQIRRLIIEEFYDKEFPRFELELFAESIFKMDYTIIKKENTDKPINYSPPPNKKVKFN
KNKDKSMLVAKDKMVCEICGKSINKNDIVTANKQTVIICKKCLTKLF

Sequences:

>Translated_207_residues
MKNYAKVIVEGSPISKSNFKLFNLQGRAIMPLNSGKYHDRYAVYEEKIAYEARLQNPNTVLGESLIAVLKVYYKSEKRHP
DTNNITKSIFDGIEKSGIIINDAQIRRLIIEEFYDKEFPRFELELFAESIFKMDYTIIKKENTDKPINYSPPPNKKVKFN
KNKDKSMLVAKDKMVCEICGKSINKNDIVTANKQTVIICKKCLTKLF
>Mature_207_residues
MKNYAKVIVEGSPISKSNFKLFNLQGRAIMPLNSGKYHDRYAVYEEKIAYEARLQNPNTVLGESLIAVLKVYYKSEKRHP
DTNNITKSIFDGIEKSGIIINDAQIRRLIIEEFYDKEFPRFELELFAESIFKMDYTIIKKENTDKPINYSPPPNKKVKFN
KNKDKSMLVAKDKMVCEICGKSINKNDIVTANKQTVIICKKCLTKLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23945; Mature: 23945

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNYAKVIVEGSPISKSNFKLFNLQGRAIMPLNSGKYHDRYAVYEEKIAYEARLQNPNTV
CCCCEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHH
LGESLIAVLKVYYKSEKRHPDTNNITKSIFDGIEKSGIIINDAQIRRLIIEEFYDKEFPR
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCC
FELELFAESIFKMDYTIIKKENTDKPINYSPPPNKKVKFNKNKDKSMLVAKDKMVCEICG
HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHC
KSINKNDIVTANKQTVIICKKCLTKLF
CCCCCCCEEECCCCEEEEHHHHHHHCC
>Mature Secondary Structure
MKNYAKVIVEGSPISKSNFKLFNLQGRAIMPLNSGKYHDRYAVYEEKIAYEARLQNPNTV
CCCCEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHH
LGESLIAVLKVYYKSEKRHPDTNNITKSIFDGIEKSGIIINDAQIRRLIIEEFYDKEFPR
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCC
FELELFAESIFKMDYTIIKKENTDKPINYSPPPNKKVKFNKNKDKSMLVAKDKMVCEICG
HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHC
KSINKNDIVTANKQTVIICKKCLTKLF
CCCCCCCEEECCCCEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA