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The map label for this gene is slyA [C]

Identifier: 153935526

GI number: 153935526

Start: 1988135

End: 1988578

Strand: Direct

Name: slyA [C]

Synonym: CLC_1878

Alternate gene names: 153935526

Gene position: 1988135-1988578 (Clockwise)

Preceding gene: 153935119

Following gene: 153937269

Centisome position: 52.87

GC content: 24.32

Gene sequence:

>444_bases
ATGAATAATACTCAACTTAATGAAATATCTCAAGATCTATATGATTTATTATTAAATTTACATAAAAAACTTTTGAATCC
AGATGAGTTAAAGAAAAAATTTCCTCTACCTCCCTCCCATGTAAAAGTTATTGTTTATCTTAAGCATAATGGCAATTGTT
CTATTTCTAAAATTGCTAAGGATTTATTAATTTCTAAACCTAATATGACTCCTATCATTGATAAACTAATTTCTGAAAAT
ATGGTTACTAGATATACTGACTCAAAGGATAGAAGAGTTATAAGAGTTGAATTAACAGAAAAAGGATCAATCTTTATAAA
GGATCAAGAAAAACTAGTAAAGACTTTGCTAACAGAAAAAATATCTAACCTTTCTTCTGAAGATTTACAATATCTTAGCG
ACCATATAATAGGAATAAAAAATATTATTTTAAAAATAAATTAA

Upstream 100 bases:

>100_bases
TTTAATATATTTTATATGTCAATAACTTTTTTATATTGTATAATAAGGTTGAATACAATATAATGTAATCAGAGCATAAA
ATTAACTAAGGAGGATAAAA

Downstream 100 bases:

>100_bases
TTTTTTGTAAATGTAACATAGTATAAAATAATTTTAATACTTAAAAATCCATTATTAACAATAACTTTTTTATATGATTA
CATATAAAATCAAATCTATA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator Marr Family; MarR-Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNNTQLNEISQDLYDLLLNLHKKLLNPDELKKKFPLPPSHVKVIVYLKHNGNCSISKIAKDLLISKPNMTPIIDKLISEN
MVTRYTDSKDRRVIRVELTEKGSIFIKDQEKLVKTLLTEKISNLSSEDLQYLSDHIIGIKNIILKIN

Sequences:

>Translated_147_residues
MNNTQLNEISQDLYDLLLNLHKKLLNPDELKKKFPLPPSHVKVIVYLKHNGNCSISKIAKDLLISKPNMTPIIDKLISEN
MVTRYTDSKDRRVIRVELTEKGSIFIKDQEKLVKTLLTEKISNLSSEDLQYLSDHIIGIKNIILKIN
>Mature_147_residues
MNNTQLNEISQDLYDLLLNLHKKLLNPDELKKKFPLPPSHVKVIVYLKHNGNCSISKIAKDLLISKPNMTPIIDKLISEN
MVTRYTDSKDRRVIRVELTEKGSIFIKDQEKLVKTLLTEKISNLSSEDLQYLSDHIIGIKNIILKIN

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16934; Mature: 16934

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNTQLNEISQDLYDLLLNLHKKLLNPDELKKKFPLPPSHVKVIVYLKHNGNCSISKIAK
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHH
DLLISKPNMTPIIDKLISENMVTRYTDSKDRRVIRVELTEKGSIFIKDQEKLVKTLLTEK
HHHHCCCCCCHHHHHHHHCCHHHHCCCCCCCEEEEEEEECCCCEEEECHHHHHHHHHHHH
ISNLSSEDLQYLSDHIIGIKNIILKIN
HHCCCHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MNNTQLNEISQDLYDLLLNLHKKLLNPDELKKKFPLPPSHVKVIVYLKHNGNCSISKIAK
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHH
DLLISKPNMTPIIDKLISENMVTRYTDSKDRRVIRVELTEKGSIFIKDQEKLVKTLLTEK
HHHHCCCCCCHHHHHHHHCCHHHHCCCCCCCEEEEEEEECCCCEEEECHHHHHHHHHHHH
ISNLSSEDLQYLSDHIIGIKNIILKIN
HHCCCHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA