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The map label for this gene is 153935430

Identifier: 153935430

GI number: 153935430

Start: 974159

End: 974746

Strand: Direct

Name: 153935430

Synonym: CLC_0949

Alternate gene names: NA

Gene position: 974159-974746 (Clockwise)

Preceding gene: 153936903

Following gene: 153936588

Centisome position: 25.9

GC content: 29.08

Gene sequence:

>588_bases
GTGAGGAAAAGTTTATCAGAAATGTCACTTGAAGAATTATGGATGTTGTTCCCAATAATATTGGAAGAACATAATCCCCT
GTGGGAAGAGTGGTATTTGGAAGAAAAAAAGTTAATTATGAGTATTATTGAAATTTATAATATAGAACGAATAAATCATA
TTGGAAGTACTTCTGTTAATAGATTGATTGCAAAACCAACAATAGATATATTGCTTGAAATAACAAGGGATTGTGATTTG
AAGTTTTTAGTAAATGTGTTGGAGGAGAATGGATATATTTTTGAAAAGCAACCACAAAAGCCAGCACCGCATATGATGTT
TATGAAAGGTTATACAGAAAAAGGATTTGCTGAAAAGGTATTTCATCTTCATGTAAGATATTTAGGTGATTGGGATGAAT
TATATTTTAGAGATTATTTGCGATCACATACGGATATTTCTCAAGCCTATGGAGATTTAAAAATTGACCTTAAAGATAAA
TATGAACATAATAGAGATGGTTATACGGAAGCAAAAACGGAATTTATTAGAAAATATACTACTATTGCAAAAATAGAATT
TAACAATAAATATAGTTCACGAGAATGA

Upstream 100 bases:

>100_bases
TTGAAAATTAATATTTTGAAAATGGAATAATAGAGTATTCCTATGTTATAATTTACAAAAAGATTATGCATATTTTATTT
CATAAAAGGAGAATTGAGTG

Downstream 100 bases:

>100_bases
GAAATAAATAATTACCCTCATCTAACTAGGTTAATTTGTGTTAACTGAGGGTAGTGTGTAATACCGAAAAGTGTATAAGA
TTATACTATTGTAACTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MRKSLSEMSLEELWMLFPIILEEHNPLWEEWYLEEKKLIMSIIEIYNIERINHIGSTSVNRLIAKPTIDILLEITRDCDL
KFLVNVLEENGYIFEKQPQKPAPHMMFMKGYTEKGFAEKVFHLHVRYLGDWDELYFRDYLRSHTDISQAYGDLKIDLKDK
YEHNRDGYTEAKTEFIRKYTTIAKIEFNNKYSSRE

Sequences:

>Translated_195_residues
MRKSLSEMSLEELWMLFPIILEEHNPLWEEWYLEEKKLIMSIIEIYNIERINHIGSTSVNRLIAKPTIDILLEITRDCDL
KFLVNVLEENGYIFEKQPQKPAPHMMFMKGYTEKGFAEKVFHLHVRYLGDWDELYFRDYLRSHTDISQAYGDLKIDLKDK
YEHNRDGYTEAKTEFIRKYTTIAKIEFNNKYSSRE
>Mature_195_residues
MRKSLSEMSLEELWMLFPIILEEHNPLWEEWYLEEKKLIMSIIEIYNIERINHIGSTSVNRLIAKPTIDILLEITRDCDL
KFLVNVLEENGYIFEKQPQKPAPHMMFMKGYTEKGFAEKVFHLHVRYLGDWDELYFRDYLRSHTDISQAYGDLKIDLKDK
YEHNRDGYTEAKTEFIRKYTTIAKIEFNNKYSSRE

Specific function: Unknown

COG id: COG2320

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0157 (GrpB) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007344 [H]

Pfam domain/function: PF04229 UPF0157 [H]

EC number: NA

Molecular weight: Translated: 23513; Mature: 23513

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSLSEMSLEELWMLFPIILEEHNPLWEEWYLEEKKLIMSIIEIYNIERINHIGSTSVN
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RLIAKPTIDILLEITRDCDLKFLVNVLEENGYIFEKQPQKPAPHMMFMKGYTEKGFAEKV
HHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCCCCHHHHH
FHLHVRYLGDWDELYFRDYLRSHTDISQAYGDLKIDLKDKYEHNRDGYTEAKTEFIRKYT
HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCEEEEEHHHCCCCCCCCHHHHHHHHHHHH
TIAKIEFNNKYSSRE
HHEEEEECCCCCCCC
>Mature Secondary Structure
MRKSLSEMSLEELWMLFPIILEEHNPLWEEWYLEEKKLIMSIIEIYNIERINHIGSTSVN
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RLIAKPTIDILLEITRDCDLKFLVNVLEENGYIFEKQPQKPAPHMMFMKGYTEKGFAEKV
HHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCCCCHHHHH
FHLHVRYLGDWDELYFRDYLRSHTDISQAYGDLKIDLKDKYEHNRDGYTEAKTEFIRKYT
HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCEEEEEHHHCCCCCCCCHHHHHHHHHHHH
TIAKIEFNNKYSSRE
HHEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]