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The map label for this gene is 153935353

Identifier: 153935353

GI number: 153935353

Start: 962412

End: 963272

Strand: Direct

Name: 153935353

Synonym: CLC_0938

Alternate gene names: NA

Gene position: 962412-963272 (Clockwise)

Preceding gene: 153937029

Following gene: 153937782

Centisome position: 25.59

GC content: 24.74

Gene sequence:

>861_bases
TTGAAGAATGAGTTATGTAAAATTAGAGAAATAGATGAAAAGGTAAAAGGTAGGTTAGAGTATATAAAATCTAATAATGA
TAGTATGATATGTGATATTAATACAATAAAAGCTTTAAAAAATAACATATATGAAAAAACATCTAAAATATTTATATATA
ACTTAAAAAAGCTCATTCAGTTAGAAATAACACAAAAAAATCTTGCTAAGAAAATAGGTGTTTCAGAAGATTTACTTTCT
AAATACAAATCAGCAGAAGCTTTTCCATCTATAGAAACCTTAATATATATTTGTGAAGTATATAATATAAGCATAGATAA
ACTTACTTCTATTCCACTAACAGCAGCTGATATGGAAAACTTAGAAAATAATATGGATATTAATACAGATATATTTGAAG
ATAGATATTATGTTTATTTTTTAGTTACTAATATAGCTAGAGAAGGAGCTATACATGAAGGTATTGTTGAATTTTTCAAT
GATAATGTAGTATTTAAAATTCTTTCTAATGGCCAAGTTGTTAAGTTATTTAAAGGAGACTACAATACTTTTGATAAGCT
TATATTCTTCAATTTACAAAGTGCTAATGACGGTATTACATATATAAATATGATTAAACCTAATGTAAATAAAAATAAAT
ATGTGGGAGGTATAGCTTTGCTTATGTTACCTTCAGATGCAAATAGTAAACCTTGTGCTCAAAAAATTCTCTTCAGTAAA
ATAAGGGTAGATAGGGAATTACATTACGAAAGATTAAAAAAACTTTTAAGCTTTTCTTGTCAAGAAACAACTTTTGGACA
TATAAAATTATCCTCAGTTGAAGATGAGGATGCTTATAATTTTATTAGAAAACTGATCTAA

Upstream 100 bases:

>100_bases
ATAGATATATATTAGTATCAAAATAAATTGAAAAGTATAAAATACTAAATTGAATATTATTCAAGTAACTTGATTATGAA
TATAATTTGGAGGGATAATT

Downstream 100 bases:

>100_bases
TCCATCAATGGGATAAAGAATTAGTATTATTAAGGGAGAACCGTATCATAAGTAAATGCGATTTTTACTATTTTGAAGAT
GCGGTACTAAGACATACTTT

Product: putative DNA-binding protein

Products: NA

Alternate protein names: DicA/HipB/AnsR Family Transcriptional Regulator

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKNELCKIREIDEKVKGRLEYIKSNNDSMICDINTIKALKNNIYEKTSKIFIYNLKKLIQLEITQKNLAKKIGVSEDLLS
KYKSAEAFPSIETLIYICEVYNISIDKLTSIPLTAADMENLENNMDINTDIFEDRYYVYFLVTNIAREGAIHEGIVEFFN
DNVVFKILSNGQVVKLFKGDYNTFDKLIFFNLQSANDGITYINMIKPNVNKNKYVGGIALLMLPSDANSKPCAQKILFSK
IRVDRELHYERLKKLLSFSCQETTFGHIKLSSVEDEDAYNFIRKLI

Sequences:

>Translated_286_residues
MKNELCKIREIDEKVKGRLEYIKSNNDSMICDINTIKALKNNIYEKTSKIFIYNLKKLIQLEITQKNLAKKIGVSEDLLS
KYKSAEAFPSIETLIYICEVYNISIDKLTSIPLTAADMENLENNMDINTDIFEDRYYVYFLVTNIAREGAIHEGIVEFFN
DNVVFKILSNGQVVKLFKGDYNTFDKLIFFNLQSANDGITYINMIKPNVNKNKYVGGIALLMLPSDANSKPCAQKILFSK
IRVDRELHYERLKKLLSFSCQETTFGHIKLSSVEDEDAYNFIRKLI
>Mature_286_residues
MKNELCKIREIDEKVKGRLEYIKSNNDSMICDINTIKALKNNIYEKTSKIFIYNLKKLIQLEITQKNLAKKIGVSEDLLS
KYKSAEAFPSIETLIYICEVYNISIDKLTSIPLTAADMENLENNMDINTDIFEDRYYVYFLVTNIAREGAIHEGIVEFFN
DNVVFKILSNGQVVKLFKGDYNTFDKLIFFNLQSANDGITYINMIKPNVNKNKYVGGIALLMLPSDANSKPCAQKILFSK
IRVDRELHYERLKKLLSFSCQETTFGHIKLSSVEDEDAYNFIRKLI

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33016; Mature: 33016

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNELCKIREIDEKVKGRLEYIKSNNDSMICDINTIKALKNNIYEKTSKIFIYNLKKLIQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHEEEEEHHHHHE
LEITQKNLAKKIGVSEDLLSKYKSAEAFPSIETLIYICEVYNISIDKLTSIPLTAADMEN
EEEHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHH
LENNMDINTDIFEDRYYVYFLVTNIAREGAIHEGIVEFFNDNVVFKILSNGQVVKLFKGD
HHCCCCCCCEEECCCEEEEEEEEHHHHCCCHHHHHHHHHCCCEEEEEECCCCEEEEECCC
YNTFDKLIFFNLQSANDGITYINMIKPNVNKNKYVGGIALLMLPSDANSKPCAQKILFSK
CCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEECEEEEEEECCCCCCCHHHHHHHHHH
IRVDRELHYERLKKLLSFSCQETTFGHIKLSSVEDEDAYNFIRKLI
HHHHHHHHHHHHHHHHCCCCCCCEECEEEEECCCCHHHHHHHHHHC
>Mature Secondary Structure
MKNELCKIREIDEKVKGRLEYIKSNNDSMICDINTIKALKNNIYEKTSKIFIYNLKKLIQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHEEEEEHHHHHE
LEITQKNLAKKIGVSEDLLSKYKSAEAFPSIETLIYICEVYNISIDKLTSIPLTAADMEN
EEEHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHH
LENNMDINTDIFEDRYYVYFLVTNIAREGAIHEGIVEFFNDNVVFKILSNGQVVKLFKGD
HHCCCCCCCEEECCCEEEEEEEEHHHHCCCHHHHHHHHHCCCEEEEEECCCCEEEEECCC
YNTFDKLIFFNLQSANDGITYINMIKPNVNKNKYVGGIALLMLPSDANSKPCAQKILFSK
CCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEECEEEEEEECCCCCCCHHHHHHHHHH
IRVDRELHYERLKKLLSFSCQETTFGHIKLSSVEDEDAYNFIRKLI
HHHHHHHHHHHHHHHHCCCCCCCEECEEEEECCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA