Click here to switch to the map view.

The map label for this gene is 153935331

Identifier: 153935331

GI number: 153935331

Start: 825718

End: 826170

Strand: Direct

Name: 153935331

Synonym: CLC_0806

Alternate gene names: NA

Gene position: 825718-826170 (Clockwise)

Preceding gene: 153934647

Following gene: 153935020

Centisome position: 21.96

GC content: 29.36

Gene sequence:

>453_bases
GTGGTAAAGCTTAAAACAATTCAGCAGTTGGAATTTCCAAACGATTTATTTAGCAATATTCCTAATAAAGTTTTAAAAAA
GTATAAACAAAGAGTAACTTCTGAAGATTTAAAAGAGTTAAGAAGGCATCCTAATAATATTAGATATACTTTGCTCGTTT
CATTTTTTTGGATGAGAGGAAGAGAAATGACAGATAACCTTATAAAGTTACTTATACAAATTATACATAGGATAAGCGTA
AGAGCTGAAAGGAAAATTGAAAAAGAATTTATTAACGATTTTAGAAAGGTTAATGGTAAAACTGGAATTCTTTTTCAAAT
GACAGATGCAGCATTAAATCACCCTGAAGGAATAGTTAAAGAAGTTCTATTTCCTGTAACAAGCTCAACTCAAGGTTTAG
CAAGGATCCCCGGGGTATGTAAACAAATTGTAAATACAATTTGTTTAATTTGA

Upstream 100 bases:

>100_bases
AGGTCTGTCCTTAGCAGATAATACTGAAGTAGATTCTATTTCTTTTAGTGAATTACGTTCTGATCCTGGAAGGATTGGTC
TTGAGAGTGTATTTAAAGAA

Downstream 100 bases:

>100_bases
AAGTGGAGATCTTTTAGCACTTAAAGCTACAAGAATTATAACAACTGAAACAGAAGAAATTGCAATAGAAGAATAATTTA
AAAAGCTCTCACATTGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase; Resolvase-Like Protein; Resolvase Fragment; Transposase Protein

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MVKLKTIQQLEFPNDLFSNIPNKVLKKYKQRVTSEDLKELRRHPNNIRYTLLVSFFWMRGREMTDNLIKLLIQIIHRISV
RAERKIEKEFINDFRKVNGKTGILFQMTDAALNHPEGIVKEVLFPVTSSTQGLARIPGVCKQIVNTICLI

Sequences:

>Translated_150_residues
MVKLKTIQQLEFPNDLFSNIPNKVLKKYKQRVTSEDLKELRRHPNNIRYTLLVSFFWMRGREMTDNLIKLLIQIIHRISV
RAERKIEKEFINDFRKVNGKTGILFQMTDAALNHPEGIVKEVLFPVTSSTQGLARIPGVCKQIVNTICLI
>Mature_150_residues
MVKLKTIQQLEFPNDLFSNIPNKVLKKYKQRVTSEDLKELRRHPNNIRYTLLVSFFWMRGREMTDNLIKLLIQIIHRISV
RAERKIEKEFINDFRKVNGKTGILFQMTDAALNHPEGIVKEVLFPVTSSTQGLARIPGVCKQIVNTICLI

Specific function: Unknown

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17492; Mature: 17492

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLKTIQQLEFPNDLFSNIPNKVLKKYKQRVTSEDLKELRRHPNNIRYTLLVSFFWMRG
CCCCHHHHHHCCCHHHHHHCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHC
REMTDNLIKLLIQIIHRISVRAERKIEKEFINDFRKVNGKTGILFQMTDAALNHPEGIVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCHHHHH
EVLFPVTSSTQGLARIPGVCKQIVNTICLI
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVKLKTIQQLEFPNDLFSNIPNKVLKKYKQRVTSEDLKELRRHPNNIRYTLLVSFFWMRG
CCCCHHHHHHCCCHHHHHHCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHC
REMTDNLIKLLIQIIHRISVRAERKIEKEFINDFRKVNGKTGILFQMTDAALNHPEGIVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCHHHHH
EVLFPVTSSTQGLARIPGVCKQIVNTICLI
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA