| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is 153935317
Identifier: 153935317
GI number: 153935317
Start: 678000
End: 679106
Strand: Direct
Name: 153935317
Synonym: CLC_0660
Alternate gene names: NA
Gene position: 678000-679106 (Clockwise)
Preceding gene: 153936528
Following gene: 153934579
Centisome position: 18.03
GC content: 25.75
Gene sequence:
>1107_bases ATGAGAAAAAAAGCTATAGTTTCTTTATTATTAATATTGATAGTTATGCTAAGTGCTTCAGGTTGTGGAAAGAAACAAAA AACAAGTGTATTAACAAATGATGTAAAACAACAAGAGGCTATGAAAGAAAATGAAATAAAAAAATTTATTAAAGATGGAA CTAATTTTTTAAATTCAGGAAAATATGATGATGCTAAAAGTTCTTTTGAAAAAGCAATTTCAATGGACAAGTCTAATAAG GTATCTTATATAGAAATAAAAAATAAATATATGGAAAAGAAAAGAATAGATGATGCTTATTATTTTATAAAATTAGCCGT AAGCAATAATGTTGATACTGAAAATATGAAAAAATTATTAGATAATATAAAATCAAAATTTGAAGTTACTAAATTAGATG CGGGTGTATATCAAAGTCATGAATATCAGTTACCAGATAAAATTAAAGCAAAAATAAATAATGAGGACAAAGAGGTTGGA GTTGTTTGGAATAATAATAATGTAGACACAAGTAAAGTAGGAACCATAAAGTACGAAGGTAAAATAGAACAGTATGATAG AGATGCTGAATTAAATCTTCAAATAATTGAGATTGAGAAAGAAAAAGAGGCTAAAGAAGAAAATAACACTGAAAAAGCGA AGAATACTCAAGAAGAAAATAAGAATGAAAAAGCAAAAACAGGGAAATCAGGAAAACAGATAGGATTTATAAATGAAATA TATGAACAAAATGGTAAAAGATATTTAAAATGTGACGAAGTAGAATTTTTCCTTAACGATGGTACTAATGAGAGTGCTCT TAAAGCAGAAGCTATAAAAGATGGCAAAGAAAAGGAGTGGAATGCTAGAAGGATATCACATCAGTTTTATATTAGAAATA AAGATAAGAGTTTAGAAACTTATGAAATATCCCCAAAAGTGGACGTATATGTTTGTAAATATCGTATAGATTCAAATGCA ACAAATTCTGCAGATTTAACAAAAATTGGTTATGAAAAATTTAAGACTTTAGATAATATTTATGGTTCAGCTGATAATCT CTATTTACATTATATATATGTAGAAAATAATGTAATAGTAAGAATAGAAGAACAGTTTATACCTTAA
Upstream 100 bases:
>100_bases ATTTTAAATTTTTATTGGAAAATATGTTAGCTGATATGTTAGTTATGGTAAAAATACCATGATAATATCTAAGTATACCA AATGCAGGGAGTGAAAATTC
Downstream 100 bases:
>100_bases AATTATGAAATATCAAGCAAGCTAAAAATATCTTAGGTTAAATAGTGGTTAGTATAAGAATATTACTGAAAGAAAGAGTT AGTAATATTCTTATATGTAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MRKKAIVSLLLILIVMLSASGCGKKQKTSVLTNDVKQQEAMKENEIKKFIKDGTNFLNSGKYDDAKSSFEKAISMDKSNK VSYIEIKNKYMEKKRIDDAYYFIKLAVSNNVDTENMKKLLDNIKSKFEVTKLDAGVYQSHEYQLPDKIKAKINNEDKEVG VVWNNNNVDTSKVGTIKYEGKIEQYDRDAELNLQIIEIEKEKEAKEENNTEKAKNTQEENKNEKAKTGKSGKQIGFINEI YEQNGKRYLKCDEVEFFLNDGTNESALKAEAIKDGKEKEWNARRISHQFYIRNKDKSLETYEISPKVDVYVCKYRIDSNA TNSADLTKIGYEKFKTLDNIYGSADNLYLHYIYVENNVIVRIEEQFIP
Sequences:
>Translated_368_residues MRKKAIVSLLLILIVMLSASGCGKKQKTSVLTNDVKQQEAMKENEIKKFIKDGTNFLNSGKYDDAKSSFEKAISMDKSNK VSYIEIKNKYMEKKRIDDAYYFIKLAVSNNVDTENMKKLLDNIKSKFEVTKLDAGVYQSHEYQLPDKIKAKINNEDKEVG VVWNNNNVDTSKVGTIKYEGKIEQYDRDAELNLQIIEIEKEKEAKEENNTEKAKNTQEENKNEKAKTGKSGKQIGFINEI YEQNGKRYLKCDEVEFFLNDGTNESALKAEAIKDGKEKEWNARRISHQFYIRNKDKSLETYEISPKVDVYVCKYRIDSNA TNSADLTKIGYEKFKTLDNIYGSADNLYLHYIYVENNVIVRIEEQFIP >Mature_368_residues MRKKAIVSLLLILIVMLSASGCGKKQKTSVLTNDVKQQEAMKENEIKKFIKDGTNFLNSGKYDDAKSSFEKAISMDKSNK VSYIEIKNKYMEKKRIDDAYYFIKLAVSNNVDTENMKKLLDNIKSKFEVTKLDAGVYQSHEYQLPDKIKAKINNEDKEVG VVWNNNNVDTSKVGTIKYEGKIEQYDRDAELNLQIIEIEKEKEAKEENNTEKAKNTQEENKNEKAKTGKSGKQIGFINEI YEQNGKRYLKCDEVEFFLNDGTNESALKAEAIKDGKEKEWNARRISHQFYIRNKDKSLETYEISPKVDVYVCKYRIDSNA TNSADLTKIGYEKFKTLDNIYGSADNLYLHYIYVENNVIVRIEEQFIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42573; Mature: 42573
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKAIVSLLLILIVMLSASGCGKKQKTSVLTNDVKQQEAMKENEIKKFIKDGTNFLNSG CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC KYDDAKSSFEKAISMDKSNKVSYIEIKNKYMEKKRIDDAYYFIKLAVSNNVDTENMKKLL CCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHH DNIKSKFEVTKLDAGVYQSHEYQLPDKIKAKINNEDKEVGVVWNNNNVDTSKVGTIKYEG HHHHHHEEEEEECCCHHCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEECC KIEQYDRDAELNLQIIEIEKEKEAKEENNTEKAKNTQEENKNEKAKTGKSGKQIGFINEI CHHHCCCCCCCEEEEEEECCHHHHHHHCCCHHHHCCHHHCCCHHHHCCCCCCEEHHHHHH YEQNGKRYLKCDEVEFFLNDGTNESALKAEAIKDGKEKEWNARRISHQFYIRNKDKSLET HHCCCCEEEEECCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHEEEEEEECCCCCCEE YEISPKVDVYVCKYRIDSNATNSADLTKIGYEKFKTLDNIYGSADNLYLHYIYVENNVIV EECCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEE RIEEQFIP EEECCCCC >Mature Secondary Structure MRKKAIVSLLLILIVMLSASGCGKKQKTSVLTNDVKQQEAMKENEIKKFIKDGTNFLNSG CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC KYDDAKSSFEKAISMDKSNKVSYIEIKNKYMEKKRIDDAYYFIKLAVSNNVDTENMKKLL CCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHH DNIKSKFEVTKLDAGVYQSHEYQLPDKIKAKINNEDKEVGVVWNNNNVDTSKVGTIKYEG HHHHHHEEEEEECCCHHCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEECC KIEQYDRDAELNLQIIEIEKEKEAKEENNTEKAKNTQEENKNEKAKTGKSGKQIGFINEI CHHHCCCCCCCEEEEEEECCHHHHHHHCCCHHHHCCHHHCCCHHHHCCCCCCEEHHHHHH YEQNGKRYLKCDEVEFFLNDGTNESALKAEAIKDGKEKEWNARRISHQFYIRNKDKSLET HHCCCCEEEEECCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHEEEEEEECCCCCCEE YEISPKVDVYVCKYRIDSNATNSADLTKIGYEKFKTLDNIYGSADNLYLHYIYVENNVIV EECCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEE RIEEQFIP EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA