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The map label for this gene is sagD

Identifier: 153935261

GI number: 153935261

Start: 572844

End: 574202

Strand: Direct

Name: sagD

Synonym: CLC_0563

Alternate gene names: NA

Gene position: 572844-574202 (Clockwise)

Preceding gene: 153937765

Following gene: 153935889

Centisome position: 15.23

GC content: 28.18

Gene sequence:

>1359_bases
ATGATAAAATTTTCCCCAAGTTTTAATAATATATTAGAGAATTTTAAATCATTAGCAGGAAATCAAAGTGGTATATTAGA
GGCTGCATGTATGCCTGTAGTTAACTTTAATAGTGATGTGTCTTTAAAAAGCATAACAGGAAATATGCCAGATTATCATA
AACAAGTATTTAATAAAGATGTGTCCATGCAATATCACATAATGGGTTATGGATCTCATTACGAGGAAGCTTTAATTAAA
TATACCGGTGAAAGTATAGAAAGATATTCTAGTATTATGGGACCAACACTATTAAAAGATAAAATTGTATATGAAAGTTA
TAAAGAATTAAGTAAAAACAATAAAGTCATGCCCTTAAAATATATAGACGTATTCACAGAAAATCAAATAAAGAAAGCTA
AGGAATTAAATGTGTCTATTTGTGATAAAAAAGTAGAGGAAGATGACATAATAGGATGGATTAAATGTCCTTCACTATTA
AAAAAAGGTAAAGAAATATATGTACCAGCAAAGATGATGTTTGTAGGCTATGAAGAGGATAAAAATAAAGGTGAGATGAC
TTTTATACCATCCTTTAGTACAGGAACAGCAGCACATAAAAGTTTAAAGAAAGCCCTTTTAAATGCTTTAGTTGAGTATA
TTCAAATTGATTCTTTTATGATTAATTGGCATACAAAAGGAAAATGTTCTTTAGTGAAAATAGATGATGAAAATGTGCTT
AAAGTTTTAGAAGATGTAAATTTAGGAGAAAAGTCTCCCTATGAAATAATACCTTTATATATGTCTTTGGAGGAATGTCC
TATACATAATTTTGGGGTTTTCTTAAGAAGAAAGGATAATAAACTTCCTTATTTATTATTTGGTATACAAGGGGGACTGG
ATGCTTCTCATGCTTTAACTAGAGGGATAATGGAAGCAGCTTCAATATCCTATGGTGCATATTTTAATGCAATTTACAAC
AAAGATATGTTAAATAATGTAATAAAAGATGATCATAAATTTTTAGATTTAGATTCAAATGTGCTATATTATTCTCTTCC
AAATAAAATTGAAGAAAAAAATAAATTAATAGAAGATTTTATAGGAGATGAAATTACTCTAAGTTCTTTAAATAAATTAA
ATATAAAAGGTGTAGATGAGCAAATAAAAACTTTATTAAATTATTTAAAGGATATAAGTGAATATGCAGTATATTTAGAT
TTAACTCCACCAGAAACTAGGGACAAGGGATGGTATGTTATGAGAGCTATGATTCCGGAATTAATTGAAATGTGTATACC
GGAGTTTCCTTTTGAAAACCATCCAAGAATGAAAAAATATGGAGGGGTGATTAATGAATATCCGCACCCAATGCCTTAA

Upstream 100 bases:

>100_bases
AAATATATCAAAGGCTAAATTGAAAGAAATAAACATATCTACTAGGAATATTGTGGATGGAATTTTAGAAGATATTAATT
CTTAACTAGGAGGCTTTAAC

Downstream 100 bases:

>100_bases
TTTATTAATATTATTAGTTACATTTAATCCAATAGTATTAGCTCAGTTATTTTTAAATAATGAAAAATCCTATAATGAAT
CTTTAAAAAGAAGTTTTAAA

Product: streptolysin associated protein SagD

Products: NA

Alternate protein names: Streptolysin S Biosynthesis Protein; Streptolysin S Biosynthesis Protein D; YcaO-Like Protein; YcaO-Like Family

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MIKFSPSFNNILENFKSLAGNQSGILEAACMPVVNFNSDVSLKSITGNMPDYHKQVFNKDVSMQYHIMGYGSHYEEALIK
YTGESIERYSSIMGPTLLKDKIVYESYKELSKNNKVMPLKYIDVFTENQIKKAKELNVSICDKKVEEDDIIGWIKCPSLL
KKGKEIYVPAKMMFVGYEEDKNKGEMTFIPSFSTGTAAHKSLKKALLNALVEYIQIDSFMINWHTKGKCSLVKIDDENVL
KVLEDVNLGEKSPYEIIPLYMSLEECPIHNFGVFLRRKDNKLPYLLFGIQGGLDASHALTRGIMEAASISYGAYFNAIYN
KDMLNNVIKDDHKFLDLDSNVLYYSLPNKIEEKNKLIEDFIGDEITLSSLNKLNIKGVDEQIKTLLNYLKDISEYAVYLD
LTPPETRDKGWYVMRAMIPELIEMCIPEFPFENHPRMKKYGGVINEYPHPMP

Sequences:

>Translated_452_residues
MIKFSPSFNNILENFKSLAGNQSGILEAACMPVVNFNSDVSLKSITGNMPDYHKQVFNKDVSMQYHIMGYGSHYEEALIK
YTGESIERYSSIMGPTLLKDKIVYESYKELSKNNKVMPLKYIDVFTENQIKKAKELNVSICDKKVEEDDIIGWIKCPSLL
KKGKEIYVPAKMMFVGYEEDKNKGEMTFIPSFSTGTAAHKSLKKALLNALVEYIQIDSFMINWHTKGKCSLVKIDDENVL
KVLEDVNLGEKSPYEIIPLYMSLEECPIHNFGVFLRRKDNKLPYLLFGIQGGLDASHALTRGIMEAASISYGAYFNAIYN
KDMLNNVIKDDHKFLDLDSNVLYYSLPNKIEEKNKLIEDFIGDEITLSSLNKLNIKGVDEQIKTLLNYLKDISEYAVYLD
LTPPETRDKGWYVMRAMIPELIEMCIPEFPFENHPRMKKYGGVINEYPHPMP
>Mature_452_residues
MIKFSPSFNNILENFKSLAGNQSGILEAACMPVVNFNSDVSLKSITGNMPDYHKQVFNKDVSMQYHIMGYGSHYEEALIK
YTGESIERYSSIMGPTLLKDKIVYESYKELSKNNKVMPLKYIDVFTENQIKKAKELNVSICDKKVEEDDIIGWIKCPSLL
KKGKEIYVPAKMMFVGYEEDKNKGEMTFIPSFSTGTAAHKSLKKALLNALVEYIQIDSFMINWHTKGKCSLVKIDDENVL
KVLEDVNLGEKSPYEIIPLYMSLEECPIHNFGVFLRRKDNKLPYLLFGIQGGLDASHALTRGIMEAASISYGAYFNAIYN
KDMLNNVIKDDHKFLDLDSNVLYYSLPNKIEEKNKLIEDFIGDEITLSSLNKLNIKGVDEQIKTLLNYLKDISEYAVYLD
LTPPETRDKGWYVMRAMIPELIEMCIPEFPFENHPRMKKYGGVINEYPHPMP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51772; Mature: 51772

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKFSPSFNNILENFKSLAGNQSGILEAACMPVVNFNSDVSLKSITGNMPDYHKQVFNKD
CEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCEEECCCCCEEEECCCCCCHHHHHHHCCC
VSMQYHIMGYGSHYEEALIKYTGESIERYSSIMGPTLLKDKIVYESYKELSKNNKVMPLK
CCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEH
YIDVFTENQIKKAKELNVSICDKKVEEDDIIGWIKCPSLLKKGKEIYVPAKMMFVGYEED
HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEECHHHHHCCCEEEECEEEEEEEECCC
KNKGEMTFIPSFSTGTAAHKSLKKALLNALVEYIQIDSFMINWHTKGKCSLVKIDDENVL
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEECCHHHH
KVLEDVNLGEKSPYEIIPLYMSLEECPIHNFGVFLRRKDNKLPYLLFGIQGGLDASHALT
HHHHHCCCCCCCCCEEEEEEEEHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHH
RGIMEAASISYGAYFNAIYNKDMLNNVIKDDHKFLDLDSNVLYYSLPNKIEEKNKLIEDF
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCHHHHHHHHHHHH
IGDEITLSSLNKLNIKGVDEQIKTLLNYLKDISEYAVYLDLTPPETRDKGWYVMRAMIPE
CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHH
LIEMCIPEFPFENHPRMKKYGGVINEYPHPMP
HHHHHCCCCCCCCCCCHHHHCCCHHCCCCCCC
>Mature Secondary Structure
MIKFSPSFNNILENFKSLAGNQSGILEAACMPVVNFNSDVSLKSITGNMPDYHKQVFNKD
CEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCEEECCCCCEEEECCCCCCHHHHHHHCCC
VSMQYHIMGYGSHYEEALIKYTGESIERYSSIMGPTLLKDKIVYESYKELSKNNKVMPLK
CCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEH
YIDVFTENQIKKAKELNVSICDKKVEEDDIIGWIKCPSLLKKGKEIYVPAKMMFVGYEED
HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEECHHHHHCCCEEEECEEEEEEEECCC
KNKGEMTFIPSFSTGTAAHKSLKKALLNALVEYIQIDSFMINWHTKGKCSLVKIDDENVL
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEECCHHHH
KVLEDVNLGEKSPYEIIPLYMSLEECPIHNFGVFLRRKDNKLPYLLFGIQGGLDASHALT
HHHHHCCCCCCCCCEEEEEEEEHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHH
RGIMEAASISYGAYFNAIYNKDMLNNVIKDDHKFLDLDSNVLYYSLPNKIEEKNKLIEDF
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCHHHHHHHHHHHH
IGDEITLSSLNKLNIKGVDEQIKTLLNYLKDISEYAVYLDLTPPETRDKGWYVMRAMIPE
CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHH
LIEMCIPEFPFENHPRMKKYGGVINEYPHPMP
HHHHHCCCCCCCCCCCHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA