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The map label for this gene is noc [H]

Identifier: 153935202

GI number: 153935202

Start: 3753011

End: 3753790

Strand: Reverse

Name: noc [H]

Synonym: CLC_3639

Alternate gene names: 153935202

Gene position: 3753790-3753011 (Counterclockwise)

Preceding gene: 153936099

Following gene: 153937312

Centisome position: 99.82

GC content: 26.92

Gene sequence:

>780_bases
ATGCAAAAAAATATAAATTATATTTCCACTGATAAAATTATTCCCAATTTATATCAACCTAGAAAATATTTTAATGAGGA
AAGTATAGAAGAGCTAGCGCAATCAATAAAAGTGTATGGTATAATTCAGCCATTATCTGTTAGAGAGATAAAAGATGGTG
AATATGAATTAGTTGCTGGGGAAAGAAGATTAAGGGCAGCTAAAAAATTGGGTTTAAATGAAGTTCCGGCAGTTATTATA
GATGTTACAGATAAGGATTCCGCAGCAATAGCCTTGTTAGAAAATTTACAAAGAGAAGATTTAAATTGTTTTGAGGAAGC
AGAAGCTTATCATAATTTAATACAAGAACATTTTTACACTCAAGATAAATTATCTGAAGTAATTGGGAAAAAGCAATCTA
CTATAGCAAATAAAATGAGGTTATTAAAATTATCTAAAGAAGTTAGGGAAAAAATATTAGAAAATAATTTAACAGAAAGG
CATGGCAGGGCGCTGTTAAAAATTAATGATAAGGATAAACAATTAAAAATATTGGCTATTGTTATAGAAAAAAAATTAAA
TGTCAAAAGTACAGAAGAATTAATAGAAAAGGAATTATGTGATGATAGCAATAAAAATTTAGCTTCTGATGGTAAAAAAA
GAATAAAAGGAATTTTTTCACCGGTAGTTTATGTTAATACAGTAAAACAGGTTTTTGATAAGTATGGTGTTAAGGCAAAT
TACAGATCTAAAGATCTAGATGATAAAATACAAATAACAATAACAATACCTAAAAAATAG

Upstream 100 bases:

>100_bases
AATGTAATAATTTGCAATTAAAAAAATAATAAAAAAAGAAGGAAAATTACATTTAAAGAAGAAATGTAAATATTAGGAAG
AGAATAAGAGGGATGGTAAT

Downstream 100 bases:

>100_bases
TAGATGTTTCACGTGAAACATCTACTATTTTTTATTAAATTTTAATAAAGTATATGTAAAAGACTTTAATTATTTTACTT
TAAATTATATAATTAAAAGT

Product: parB family protein

Products: NA

Alternate protein names: Noc [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVREIKDGEYELVAGERRLRAAKKLGLNEVPAVII
DVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYTQDKLSEVIGKKQSTIANKMRLLKLSKEVREKILENNLTER
HGRALLKINDKDKQLKILAIVIEKKLNVKSTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
YRSKDLDDKIQITITIPKK

Sequences:

>Translated_259_residues
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVREIKDGEYELVAGERRLRAAKKLGLNEVPAVII
DVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYTQDKLSEVIGKKQSTIANKMRLLKLSKEVREKILENNLTER
HGRALLKINDKDKQLKILAIVIEKKLNVKSTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
YRSKDLDDKIQITITIPKK
>Mature_259_residues
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVREIKDGEYELVAGERRLRAAKKLGLNEVPAVII
DVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYTQDKLSEVIGKKQSTIANKMRLLKLSKEVREKILENNLTER
HGRALLKINDKDKQLKILAIVIEKKLNVKSTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
YRSKDLDDKIQITITIPKK

Specific function: Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division an

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 29818; Mature: 29818

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVREIKDGEYELVAG
CCCCCCEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEHH
ERRLRAAKKLGLNEVPAVIIDVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYT
HHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QDKLSEVIGKKQSTIANKMRLLKLSKEVREKILENNLTERHGRALLKINDKDKQLKILAI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCCCEEEHHE
VIEKKLNVKSTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
EHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YRSKDLDDKIQITITIPKK
CCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVREIKDGEYELVAG
CCCCCCEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEHH
ERRLRAAKKLGLNEVPAVIIDVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYT
HHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QDKLSEVIGKKQSTIANKMRLLKLSKEVREKILENNLTERHGRALLKINDKDKQLKILAI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCCCEEEHHE
VIEKKLNVKSTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
EHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YRSKDLDDKIQITITIPKK
CCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA