| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is 153935199
Identifier: 153935199
GI number: 153935199
Start: 88901
End: 89512
Strand: Direct
Name: 153935199
Synonym: CLC_0112
Alternate gene names: NA
Gene position: 88901-89512 (Clockwise)
Preceding gene: 153937146
Following gene: 153936391
Centisome position: 2.36
GC content: 22.88
Gene sequence:
>612_bases GTGGAAAATAACAATTTAGAAAAAATAGAGTATATAAACAAGCTTGCAAAAGAGATATCTAATAATACAATAGTAGATTA TGAAGATTTTCCTAAATATGATTTGTTTTTATCACAAGTAATTGATTATTTGAATGATAAATTTGAAGAGGAAGATTATA CAAATAATATTGTTCAAAATTACATTAAAAATGAGGTAATATCAAAGCCACAAGATGGTAAAAAGAGAGGATATACAAAA CTTCATTTAGTTCAATTAGTGCTATTAAGTTATATGAGACCATTACTTACTACTGAGGAAATAAAAAATGTGTTTACATT AGCTTTTAATGAGATAAATGATAGAGGTGATGATATAATATCTTGGGAAAATGCATATAAGATATTCTCAGATATACAAA AGGATAGTTTTAAAGACTTTGTAGCTAGACAACATTTTGATGAAGATAAATTAAAAGACATAATAACAAAATTAGAGTTA AATAGTGATGAAGAAAATAGAATAACTATATTTTTAATAGTAATGACTTTAATATGTCAAGCTAGTGCTATAAAAAAATT AGTTAAAAAGATAGTAAATGATTATACTGATAAATTAGATTATAATGAATAA
Upstream 100 bases:
>100_bases ATTTAAGAGAAAATAAAAGTTTATACTAATAATATTGAATTTTATAGTTTAATTTAATATACTTTAGGGTAAACTTAAGT ATGCTTGGAGGTCTTTAAAG
Downstream 100 bases:
>100_bases ATAATTTTTGTGTATTTTTATAGATCACTTAAAAAGTTATTATTAATCCTTAATAATGGCTTTTTAAGTGATTTATTTTT GTAAAAGTAATTATTAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MENNNLEKIEYINKLAKEISNNTIVDYEDFPKYDLFLSQVIDYLNDKFEEEDYTNNIVQNYIKNEVISKPQDGKKRGYTK LHLVQLVLLSYMRPLLTTEEIKNVFTLAFNEINDRGDDIISWENAYKIFSDIQKDSFKDFVARQHFDEDKLKDIITKLEL NSDEENRITIFLIVMTLICQASAIKKLVKKIVNDYTDKLDYNE
Sequences:
>Translated_203_residues MENNNLEKIEYINKLAKEISNNTIVDYEDFPKYDLFLSQVIDYLNDKFEEEDYTNNIVQNYIKNEVISKPQDGKKRGYTK LHLVQLVLLSYMRPLLTTEEIKNVFTLAFNEINDRGDDIISWENAYKIFSDIQKDSFKDFVARQHFDEDKLKDIITKLEL NSDEENRITIFLIVMTLICQASAIKKLVKKIVNDYTDKLDYNE >Mature_203_residues MENNNLEKIEYINKLAKEISNNTIVDYEDFPKYDLFLSQVIDYLNDKFEEEDYTNNIVQNYIKNEVISKPQDGKKRGYTK LHLVQLVLLSYMRPLLTTEEIKNVFTLAFNEINDRGDDIISWENAYKIFSDIQKDSFKDFVARQHFDEDKLKDIITKLEL NSDEENRITIFLIVMTLICQASAIKKLVKKIVNDYTDKLDYNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24061; Mature: 24061
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENNNLEKIEYINKLAKEISNNTIVDYEDFPKYDLFLSQVIDYLNDKFEEEDYTNNIVQN CCCCCHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH YIKNEVISKPQDGKKRGYTKLHLVQLVLLSYMRPLLTTEEIKNVFTLAFNEINDRGDDII HHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SWENAYKIFSDIQKDSFKDFVARQHFDEDKLKDIITKLELNSDEENRITIFLIVMTLICQ HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH ASAIKKLVKKIVNDYTDKLDYNE HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MENNNLEKIEYINKLAKEISNNTIVDYEDFPKYDLFLSQVIDYLNDKFEEEDYTNNIVQN CCCCCHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH YIKNEVISKPQDGKKRGYTKLHLVQLVLLSYMRPLLTTEEIKNVFTLAFNEINDRGDDII HHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SWENAYKIFSDIQKDSFKDFVARQHFDEDKLKDIITKLELNSDEENRITIFLIVMTLICQ HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH ASAIKKLVKKIVNDYTDKLDYNE HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA