Click here to switch to the map view.

The map label for this gene is fecD [C]

Identifier: 153934850

GI number: 153934850

Start: 1044844

End: 1045911

Strand: Reverse

Name: fecD [C]

Synonym: CLC_1027

Alternate gene names: 153934850

Gene position: 1045911-1044844 (Counterclockwise)

Preceding gene: 153935415

Following gene: 153936969

Centisome position: 27.81

GC content: 30.52

Gene sequence:

>1068_bases
ATGAATAATAATAAACAAATTTTAAAGTGCAAAAATAATTGCACTTTAAAATTTATTCTATTAATTATAGCCTTGTTTGT
AATAACTACGGTTTGCATAACCTTTGGTTCTGTAAAAATAGATGTAGGTGTAACCTTTAAATCCCTTATAAATAACATAT
TAAACAAAGAAATTTTTGCTAAAGATTGGCCAAATAATATTGATAATATAGTTTTTAAATTAAGACTTCCAAGATTGCTT
TTAGCCATAGTTTCTGGTGGTGCTTTAGCCCTTGTGGGAATTTTAATGCAAACTTTAACTAGAAACTCATTAGCAGACCC
ATACATATTAGGCATATCCTCTGGTGCATCTGCAGGGGCTACCCTATCCATAGTATTAGGTGTTTTAAGTTCTTTTGGAC
ATTTTGGAATAGCCTTGGGAGCATTTTTAGGTGCTATGATTGCATCTATTATGGTATTTAAAATATCCGGAGTAAGTAAA
GTGTATTCTAAAACTAAATTAATACTAACTGGAGTTGCTGTATCCTCTATATTTACTGCAGTAACAAATTTTATAATAAC
ATTTGCCAGAAATGATAGCTTAGTTAAAAGTGCAGTATTTTGGACTATTGGTAGTTTAGCAGGAGCAAATTATAATCAAG
TAAAGTTTTCTCTTGTAATAATGGTTATAACCGCCATTTTAAGCATGTTATTATATAAAGATTTAGATGCTATGCTGTTA
GGTGAGGCCGTAGCAAAAAATATAGGTATAAATACTAAATTTATAATTAGATTTATAATGATAGCTTCTACGCTTTTAAC
AGGTACTATAGTGGCTTTTACAGGCATAATTGGATTTGTAGGCCTCATAGTTCCTCATATAGCAAGGCAAATGGTAGGCT
CTTCTCATAAAAAATTAATACCCTTTGGTATTGTTATTGGATCAATATTAATGGTAATTACAGATACTATAGCTAGAACT
ATATTATCTCCACAGGAAGTTCCTATAGGAGTAATAACTGCATTTTTAGGAGGTCCTTTCTTCCTATATTTAATGCAAAA
AAGCACCTATAGATTTGGAGGTAAGTAA

Upstream 100 bases:

>100_bases
AGTTGAATTAACTGAATTATATCCTGGTGTAAGAGTTCCTAAAACTGTAAATAAATTAGCTAAAGAATTCTACCCAGATA
AATTTTAGTTGGTGATAAGA

Downstream 100 bases:

>100_bases
ATGAAATTAAAATTAGAAGGTATAAAATATGATATAGGTTCCAAAAAACTTTTACGTGGAATAGATTTAAATGTAGAGAA
AAACCATTTTGTTGGATTAA

Product: iron chelate ABC transporter permease protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNNNKQILKCKNNCTLKFILLIIALFVITTVCITFGSVKIDVGVTFKSLINNILNKEIFAKDWPNNIDNIVFKLRLPRLL
LAIVSGGALALVGILMQTLTRNSLADPYILGISSGASAGATLSIVLGVLSSFGHFGIALGAFLGAMIASIMVFKISGVSK
VYSKTKLILTGVAVSSIFTAVTNFIITFARNDSLVKSAVFWTIGSLAGANYNQVKFSLVIMVITAILSMLLYKDLDAMLL
GEAVAKNIGINTKFIIRFIMIASTLLTGTIVAFTGIIGFVGLIVPHIARQMVGSSHKKLIPFGIVIGSILMVITDTIART
ILSPQEVPIGVITAFLGGPFFLYLMQKSTYRFGGK

Sequences:

>Translated_355_residues
MNNNKQILKCKNNCTLKFILLIIALFVITTVCITFGSVKIDVGVTFKSLINNILNKEIFAKDWPNNIDNIVFKLRLPRLL
LAIVSGGALALVGILMQTLTRNSLADPYILGISSGASAGATLSIVLGVLSSFGHFGIALGAFLGAMIASIMVFKISGVSK
VYSKTKLILTGVAVSSIFTAVTNFIITFARNDSLVKSAVFWTIGSLAGANYNQVKFSLVIMVITAILSMLLYKDLDAMLL
GEAVAKNIGINTKFIIRFIMIASTLLTGTIVAFTGIIGFVGLIVPHIARQMVGSSHKKLIPFGIVIGSILMVITDTIART
ILSPQEVPIGVITAFLGGPFFLYLMQKSTYRFGGK
>Mature_355_residues
MNNNKQILKCKNNCTLKFILLIIALFVITTVCITFGSVKIDVGVTFKSLINNILNKEIFAKDWPNNIDNIVFKLRLPRLL
LAIVSGGALALVGILMQTLTRNSLADPYILGISSGASAGATLSIVLGVLSSFGHFGIALGAFLGAMIASIMVFKISGVSK
VYSKTKLILTGVAVSSIFTAVTNFIITFARNDSLVKSAVFWTIGSLAGANYNQVKFSLVIMVITAILSMLLYKDLDAMLL
GEAVAKNIGINTKFIIRFIMIASTLLTGTIVAFTGIIGFVGLIVPHIARQMVGSSHKKLIPFGIVIGSILMVITDTIART
ILSPQEVPIGVITAFLGGPFFLYLMQKSTYRFGGK

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=288, Percent_Identity=35.4166666666667, Blast_Score=172, Evalue=4e-44,
Organism=Escherichia coli, GI1788004, Length=301, Percent_Identity=31.5614617940199, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1790741, Length=285, Percent_Identity=30.5263157894737, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1786805, Length=298, Percent_Identity=35.2348993288591, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1786347, Length=283, Percent_Identity=30.0353356890459, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1786804, Length=337, Percent_Identity=27.0029673590504, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 38066; Mature: 38066

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNKQILKCKNNCTLKFILLIIALFVITTVCITFGSVKIDVGVTFKSLINNILNKEIFA
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHH
KDWPNNIDNIVFKLRLPRLLLAIVSGGALALVGILMQTLTRNSLADPYILGISSGASAGA
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCH
TLSIVLGVLSSFGHFGIALGAFLGAMIASIMVFKISGVSKVYSKTKLILTGVAVSSIFTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VTNFIITFARNDSLVKSAVFWTIGSLAGANYNQVKFSLVIMVITAILSMLLYKDLDAMLL
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEAVAKNIGINTKFIIRFIMIASTLLTGTIVAFTGIIGFVGLIVPHIARQMVGSSHKKLI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
PFGIVIGSILMVITDTIARTILSPQEVPIGVITAFLGGPFFLYLMQKSTYRFGGK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNNNKQILKCKNNCTLKFILLIIALFVITTVCITFGSVKIDVGVTFKSLINNILNKEIFA
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHH
KDWPNNIDNIVFKLRLPRLLLAIVSGGALALVGILMQTLTRNSLADPYILGISSGASAGA
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCH
TLSIVLGVLSSFGHFGIALGAFLGAMIASIMVFKISGVSKVYSKTKLILTGVAVSSIFTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VTNFIITFARNDSLVKSAVFWTIGSLAGANYNQVKFSLVIMVITAILSMLLYKDLDAMLL
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEAVAKNIGINTKFIIRFIMIASTLLTGTIVAFTGIIGFVGLIVPHIARQMVGSSHKKLI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
PFGIVIGSILMVITDTIARTILSPQEVPIGVITAFLGGPFFLYLMQKSTYRFGGK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]