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The map label for this gene is 153934769

Identifier: 153934769

GI number: 153934769

Start: 3417867

End: 3418430

Strand: Reverse

Name: 153934769

Synonym: CLC_3271

Alternate gene names: NA

Gene position: 3418430-3417867 (Counterclockwise)

Preceding gene: 153935448

Following gene: 153936199

Centisome position: 90.9

GC content: 30.85

Gene sequence:

>564_bases
ATGGAGCATAAAAAAATTATGTATAATACTAATATATTAGATATAGTACAAGTAGCCATTATGGCAGCAATAATATGTGT
TGTTACATTTACTATAAAAGTTCCAACCTATGCTGGATATACCCACCTAGGGGATAGTATAGTACTTTTATCAGTAGTAC
TTTTAGGAAGAAAAAAAGGAGTCCTATCATCAGCTATAGGAATGGGAATGGCAGATATAATAAGTGGATACTTAATTTGG
GCACCTTTCACAATAGTAATAAAAGGTCTAATGGCGTTTATAGCTGGAACAATAATATACAAAAACAAAAAAAATCATGA
AAATTTATCCACAAAATTATTGGGATTTGTATTAGCGGGAATTTGGATGGTAGCTGCTTACTATTTAGCAGGGGCCGTAA
TAACTAGATTTATAATGCTTGAAAGTGCTACTTTAAATCAAGCCTTATTAATAGCTTTAAAGGATATACCATCAAATATA
GCACAAGCTGTAGTTGGAATTGTAATAGCTTTACCGCTAGGAAAAGCATTAAAAAAATCAAGTCTAATGAAAAGCATAAA
ATAA

Upstream 100 bases:

>100_bases
ATAATAAAATTTATTTAAATAATGTACCCATACATTTTAAAAAAATATAAATACTTCATATACTATATATAAAGTGAATT
TTAAGGAGGGGGGGATTATA

Downstream 100 bases:

>100_bases
GGGAGTTGCGTTCGCAACTTCCTTATTTTACGAATTGTTTTCAAAATACTCTGTAAATATTAAATTAAATGAATTAGAAT
ATAATATATAAATAGGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Pyridoxin-Like ECF Transporter Substrate-Specific Component; Integral Membrane Protein

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MEHKKIMYNTNILDIVQVAIMAAIICVVTFTIKVPTYAGYTHLGDSIVLLSVVLLGRKKGVLSSAIGMGMADIISGYLIW
APFTIVIKGLMAFIAGTIIYKNKKNHENLSTKLLGFVLAGIWMVAAYYLAGAVITRFIMLESATLNQALLIALKDIPSNI
AQAVVGIVIALPLGKALKKSSLMKSIK

Sequences:

>Translated_187_residues
MEHKKIMYNTNILDIVQVAIMAAIICVVTFTIKVPTYAGYTHLGDSIVLLSVVLLGRKKGVLSSAIGMGMADIISGYLIW
APFTIVIKGLMAFIAGTIIYKNKKNHENLSTKLLGFVLAGIWMVAAYYLAGAVITRFIMLESATLNQALLIALKDIPSNI
AQAVVGIVIALPLGKALKKSSLMKSIK
>Mature_187_residues
MEHKKIMYNTNILDIVQVAIMAAIICVVTFTIKVPTYAGYTHLGDSIVLLSVVLLGRKKGVLSSAIGMGMADIISGYLIW
APFTIVIKGLMAFIAGTIIYKNKKNHENLSTKLLGFVLAGIWMVAAYYLAGAVITRFIMLESATLNQALLIALKDIPSNI
AQAVVGIVIALPLGKALKKSSLMKSIK

Specific function: Unknown

COG id: COG4720

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20138; Mature: 20138

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHKKIMYNTNILDIVQVAIMAAIICVVTFTIKVPTYAGYTHLGDSIVLLSVVLLGRKKG
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHCCCH
VLSSAIGMGMADIISGYLIWAPFTIVIKGLMAFIAGTIIYKNKKNHENLSTKLLGFVLAG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IWMVAAYYLAGAVITRFIMLESATLNQALLIALKDIPSNIAQAVVGIVIALPLGKALKKS
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SLMKSIK
HHHHHCC
>Mature Secondary Structure
MEHKKIMYNTNILDIVQVAIMAAIICVVTFTIKVPTYAGYTHLGDSIVLLSVVLLGRKKG
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHCCCH
VLSSAIGMGMADIISGYLIWAPFTIVIKGLMAFIAGTIIYKNKKNHENLSTKLLGFVLAG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IWMVAAYYLAGAVITRFIMLESATLNQALLIALKDIPSNIAQAVVGIVIALPLGKALKKS
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SLMKSIK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA