| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is 153934741
Identifier: 153934741
GI number: 153934741
Start: 2529679
End: 2530383
Strand: Reverse
Name: 153934741
Synonym: CLC_2409
Alternate gene names: NA
Gene position: 2530383-2529679 (Counterclockwise)
Preceding gene: 153937749
Following gene: 153937051
Centisome position: 67.29
GC content: 33.48
Gene sequence:
>705_bases ATGAATATTAATAATGCAAATCTAAGTTTTGGAGATATGGCATATGGTAATAATCCAAATGAAATAGACCTACATCACGC AGAGGCTAGTTCTTGCAGTGTTTACGATGTTCATTCATGGCACAAAGGAAATGGATGGGCGGGTATAGGTTATCATTATT TTGTAAGAAAAAACGGAGAGATATGGAAAGGTAGACCAGATAATGCCATAGGGGCTCATGTAGCTGGTCATAATACCAAT ACGTTAGGGATTTGTGCCGAAGGTAGTTATATGCGTGAAACTATGCCACAAGCACAGAAAAATGCAATTATAGAATTAGG CAGATACTTATGTAATAAATATGGAATTAAAAAAGTATATGGACATAGAGAAGTAGGAAGTTCCAACTGTCCTGGCACTA ATTATCCTTTAGTAGAAATAAAAAATACTATTTTAAATAATAAACCAATACAAAAAGAGGAGGAAAAGAAAGTGAAAAAT TTAGTAGTATACAATAACATATGTGACCAGAGGGCTGCTGAGTATCTAGCAGACAAATTGAACTGTCCAACTATATGGGG AGCTAGACCTTTTGATTATTCTTGTGTACAAAATGTTATAGGTGTAGGGGGTAAAAAAGAGCAATATACAAGTTATTTAA AAACTCTAGTATCTGGGAATAACAGATATGATACAATGCAAGCAGTCCTAAATTATAATAAATAA
Upstream 100 bases:
>100_bases ATTTTATTTTGGACAGTCTAGTGCTAGACAAGCGGTAAAGGAAAGTAAAGAGCAGGAATAAACCTGTTCTTTTTTATATT AAATTTTAGGAGGTAATTTT
Downstream 100 bases:
>100_bases GCTTTAAAAGGTGCTCTCTTTTATGGGAGTACCTTCTTTTTTTATTTTTTGAACAATATAGGTATGCACATGCATATTAT CATTATAAAGCCTATCACCA
Product: putative N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: Prophage; N-Acetylmuramyl-L-Alanine Amidase; Autolytic Lysozyme; Negative Regulator Of Beta-Lactamase Expression; Ankyrin Repeat-Containing Protein; 1 4-Beta-N-Acetylmuramidase; N-Acetylmuramoyl-L-Alanine Amidase Phage Related Protein; LOW QUALITY PROTEIN N-Acetylmuramoyl-L-Alanine Amidase; Phage Related N-Acetylmuramoyl-L-Alanine Amidase
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MNINNANLSFGDMAYGNNPNEIDLHHAEASSCSVYDVHSWHKGNGWAGIGYHYFVRKNGEIWKGRPDNAIGAHVAGHNTN TLGICAEGSYMRETMPQAQKNAIIELGRYLCNKYGIKKVYGHREVGSSNCPGTNYPLVEIKNTILNNKPIQKEEEKKVKN LVVYNNICDQRAAEYLADKLNCPTIWGARPFDYSCVQNVIGVGGKKEQYTSYLKTLVSGNNRYDTMQAVLNYNK
Sequences:
>Translated_234_residues MNINNANLSFGDMAYGNNPNEIDLHHAEASSCSVYDVHSWHKGNGWAGIGYHYFVRKNGEIWKGRPDNAIGAHVAGHNTN TLGICAEGSYMRETMPQAQKNAIIELGRYLCNKYGIKKVYGHREVGSSNCPGTNYPLVEIKNTILNNKPIQKEEEKKVKN LVVYNNICDQRAAEYLADKLNCPTIWGARPFDYSCVQNVIGVGGKKEQYTSYLKTLVSGNNRYDTMQAVLNYNK >Mature_234_residues MNINNANLSFGDMAYGNNPNEIDLHHAEASSCSVYDVHSWHKGNGWAGIGYHYFVRKNGEIWKGRPDNAIGAHVAGHNTN TLGICAEGSYMRETMPQAQKNAIIELGRYLCNKYGIKKVYGHREVGSSNCPGTNYPLVEIKNTILNNKPIQKEEEKKVKN LVVYNNICDQRAAEYLADKLNCPTIWGARPFDYSCVQNVIGVGGKKEQYTSYLKTLVSGNNRYDTMQAVLNYNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24651867, Length=123, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26231; Mature: 26231
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINNANLSFGDMAYGNNPNEIDLHHAEASSCSVYDVHSWHKGNGWAGIGYHYFVRKNGE CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCEECCCCEEECCEEEEEECCCC IWKGRPDNAIGAHVAGHNTNTLGICAEGSYMRETMPQAQKNAIIELGRYLCNKYGIKKVY EECCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH GHREVGSSNCPGTNYPLVEIKNTILNNKPIQKEEEKKVKNLVVYNNICDQRAAEYLADKL CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHC NCPTIWGARPFDYSCVQNVIGVGGKKEQYTSYLKTLVSGNNRYDTMQAVLNYNK CCCEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC >Mature Secondary Structure MNINNANLSFGDMAYGNNPNEIDLHHAEASSCSVYDVHSWHKGNGWAGIGYHYFVRKNGE CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCEECCCCEEECCEEEEEECCCC IWKGRPDNAIGAHVAGHNTNTLGICAEGSYMRETMPQAQKNAIIELGRYLCNKYGIKKVY EECCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH GHREVGSSNCPGTNYPLVEIKNTILNNKPIQKEEEKKVKNLVVYNNICDQRAAEYLADKL CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHC NCPTIWGARPFDYSCVQNVIGVGGKKEQYTSYLKTLVSGNNRYDTMQAVLNYNK CCCEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA