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The map label for this gene is 153934719

Identifier: 153934719

GI number: 153934719

Start: 1964950

End: 1965327

Strand: Reverse

Name: 153934719

Synonym: CLC_1860

Alternate gene names: NA

Gene position: 1965327-1964950 (Counterclockwise)

Preceding gene: 153936659

Following gene: 153934951

Centisome position: 52.26

GC content: 30.95

Gene sequence:

>378_bases
ATGAGCAATTGTGTATTTTGTAATTATAATTCTACAGAAATAATAGCAGAAAATAGAGTTGCGTTTGCTATATTAGACAA
ATTTCCAGTAAATGAAGGACATACACTAATAATTTCTAAAAGACATTTTAATAGTTTTTTTGAAGCTACAGAGGAAGAAG
TAAAGGGAATTTATTCTCTTATGCACGAAGTAAAGGAAATGCTAGATATTCAGTATGAACCGACAGGTTACAACGTAGGG
GTAAATATAGGTTATGATGCTGGACAAACTATAATGCATCTTCATATTCATTTAATTCCAAGATACAAGGGAGATGTAGA
AAATCCCAGAGGAGGAATAAGAAAGTTAAAAACTCCTTTAGTAGAATGTGATGGTTAA

Upstream 100 bases:

>100_bases
GTTATAAATATGTTATATTCAAAAAAATAGTATAAAAAAGAGAGGTGAGGTTTAGTGAGAGTTTAAAAATTATTATACAT
TCTCTCACTAGAGATAATCT

Downstream 100 bases:

>100_bases
AAATCATGGCTATATTTAAAAAGGAGGTATTTAATATGTTTTCAAAAGATAGGTTTGTAATAGAATTAGATGATAGATAT
TTTAATCAAAAAGATTTAAT

Product: HIT family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MSNCVFCNYNSTEIIAENRVAFAILDKFPVNEGHTLIISKRHFNSFFEATEEEVKGIYSLMHEVKEMLDIQYEPTGYNVG
VNIGYDAGQTIMHLHIHLIPRYKGDVENPRGGIRKLKTPLVECDG

Sequences:

>Translated_125_residues
MSNCVFCNYNSTEIIAENRVAFAILDKFPVNEGHTLIISKRHFNSFFEATEEEVKGIYSLMHEVKEMLDIQYEPTGYNVG
VNIGYDAGQTIMHLHIHLIPRYKGDVENPRGGIRKLKTPLVECDG
>Mature_124_residues
SNCVFCNYNSTEIIAENRVAFAILDKFPVNEGHTLIISKRHFNSFFEATEEEVKGIYSLMHEVKEMLDIQYEPTGYNVGV
NIGYDAGQTIMHLHIHLIPRYKGDVENPRGGIRKLKTPLVECDG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17556280, Length=85, Percent_Identity=34.1176470588235, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 14232; Mature: 14101

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNCVFCNYNSTEIIAENRVAFAILDKFPVNEGHTLIISKRHFNSFFEATEEEVKGIYSL
CCCCEEEECCCCEEEECCCEEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
MHEVKEMLDIQYEPTGYNVGVNIGYDAGQTIMHLHIHLIPRYKGDVENPRGGIRKLKTPL
HHHHHHHHCCEECCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHCCCE
VECDG
EECCC
>Mature Secondary Structure 
SNCVFCNYNSTEIIAENRVAFAILDKFPVNEGHTLIISKRHFNSFFEATEEEVKGIYSL
CCCEEEECCCCEEEECCCEEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
MHEVKEMLDIQYEPTGYNVGVNIGYDAGQTIMHLHIHLIPRYKGDVENPRGGIRKLKTPL
HHHHHHHHCCEECCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHCCCE
VECDG
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]