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The map label for this gene is 153934678

Identifier: 153934678

GI number: 153934678

Start: 2140718

End: 2141842

Strand: Reverse

Name: 153934678

Synonym: CLC_2018

Alternate gene names: NA

Gene position: 2141842-2140718 (Counterclockwise)

Preceding gene: 153935400

Following gene: 153937366

Centisome position: 56.96

GC content: 31.56

Gene sequence:

>1125_bases
ATGAAAATTTCAAAGAAAGATGCGTTGATATGGTTTGAATTTTTTGCCATGTTGCCAGAAGAAGAAGAAGTTATGCCAAA
ACAACAAGAAATCATTTATGCTACCTTTGCACAAATTGAGGCAGCAATTGATCATAGAAATGATATGTTGATGTCAGAAA
TTAAAAATTTGAAAACCTTGGAAAATAGAACTCTTTTTGTAGGAAATGAAAGCAAATTCCCAAAAGGATGTCGTTCTTGT
CTGTTGGGAACTGGTTTGAGTGCAATTAGAAAAACGAATAAATGTAATGCAGAGTGTAAGTTCTGTTATAATTATGGAGA
ACTAGATGATATGTTTCCTATTGGCGAAGGTATGTGGGAAATCGGAGGTACAAAATTTTATGAAAAGGATATTGACTTAC
TTCTTTCTATCCACAAAAAACCTACTGGCGTTTCCTACGTTTATTTAGAGCCATTTATGGAAATTGAAAAATATTATTCT
GTTATAAAGAAATTTAGGGATGCTCAAGTTTATCAACATTTATATACAAATGGTACTTTAGCTACAGAAGAGACATTGAA
AGCATTAGGTGAAGCTGGTCTTGACGAGATACGTTTCAACTTGGGTGCATCTAATTGTTCAGACAAAGTTATTGAAAATA
TTAAAATAGCAAAAAAATATATTAAAAATGTAGGCATTGAAACTCCAATGACTCCAGAGTTTTTTGAAGCCTTTTTTAAG
AAAAAGCAAGCAATCTTAGGGACAAACCTTGATTTTATAAATTGTGCAGAACTGCATTTAAATGAAAACAACATAGATAA
TTATTATGGGGAAAATATGTATATCTCAAGACATGGCTACATATCTCCAATTTGGAGCAGGGAATTAACTTTAAAATTCA
TGAAGATAGCCGATGAAGAAAACTGGGATTTAGTAATTCATGATTGTTCAAATCATACAAAGTTTGCTAGAGATTTGAAT
TTGAGTAGTAAAGAAGGTAAGTGGTTTGGAGCAAGCAATTATGGCTGTGAATTTCCTAGGATTCCATATGAATCATTTTT
ACCAATACTACGTGATGACAATTTTAAATTTTTAAGTAAAGAAGAATTGCCTGAAGGCTATAAGGCAGGAAAATTGATTT
TTTAG

Upstream 100 bases:

>100_bases
ATCCCAAAAGGTAACATGTGGAGTGAGTTTGTCTTTAGAAGAAGAGTATGTGAAAAAGTACAGCAACAAGATTTAGATTG
TAATTAGAGGAGGATACATT

Downstream 100 bases:

>100_bases
CTAAATAAAGGTTATTAATATTGAAGAGAAAAATAGCGGAAATATTGAATTTTCCGCTATTTTTACATTGATGCACAAGT
TATTATGAAATTTTATATAG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Protein Radical SAM Family; Pyruvate Formate-Lyase Activating-Like; Radical SAM Family Protein

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKISKKDALIWFEFFAMLPEEEEVMPKQQEIIYATFAQIEAAIDHRNDMLMSEIKNLKTLENRTLFVGNESKFPKGCRSC
LLGTGLSAIRKTNKCNAECKFCYNYGELDDMFPIGEGMWEIGGTKFYEKDIDLLLSIHKKPTGVSYVYLEPFMEIEKYYS
VIKKFRDAQVYQHLYTNGTLATEETLKALGEAGLDEIRFNLGASNCSDKVIENIKIAKKYIKNVGIETPMTPEFFEAFFK
KKQAILGTNLDFINCAELHLNENNIDNYYGENMYISRHGYISPIWSRELTLKFMKIADEENWDLVIHDCSNHTKFARDLN
LSSKEGKWFGASNYGCEFPRIPYESFLPILRDDNFKFLSKEELPEGYKAGKLIF

Sequences:

>Translated_374_residues
MKISKKDALIWFEFFAMLPEEEEVMPKQQEIIYATFAQIEAAIDHRNDMLMSEIKNLKTLENRTLFVGNESKFPKGCRSC
LLGTGLSAIRKTNKCNAECKFCYNYGELDDMFPIGEGMWEIGGTKFYEKDIDLLLSIHKKPTGVSYVYLEPFMEIEKYYS
VIKKFRDAQVYQHLYTNGTLATEETLKALGEAGLDEIRFNLGASNCSDKVIENIKIAKKYIKNVGIETPMTPEFFEAFFK
KKQAILGTNLDFINCAELHLNENNIDNYYGENMYISRHGYISPIWSRELTLKFMKIADEENWDLVIHDCSNHTKFARDLN
LSSKEGKWFGASNYGCEFPRIPYESFLPILRDDNFKFLSKEELPEGYKAGKLIF
>Mature_374_residues
MKISKKDALIWFEFFAMLPEEEEVMPKQQEIIYATFAQIEAAIDHRNDMLMSEIKNLKTLENRTLFVGNESKFPKGCRSC
LLGTGLSAIRKTNKCNAECKFCYNYGELDDMFPIGEGMWEIGGTKFYEKDIDLLLSIHKKPTGVSYVYLEPFMEIEKYYS
VIKKFRDAQVYQHLYTNGTLATEETLKALGEAGLDEIRFNLGASNCSDKVIENIKIAKKYIKNVGIETPMTPEFFEAFFK
KKQAILGTNLDFINCAELHLNENNIDNYYGENMYISRHGYISPIWSRELTLKFMKIADEENWDLVIHDCSNHTKFARDLN
LSSKEGKWFGASNYGCEFPRIPYESFLPILRDDNFKFLSKEELPEGYKAGKLIF

Specific function: Unknown

COG id: COG2108

COG function: function code R; Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43302; Mature: 43302

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISKKDALIWFEFFAMLPEEEEVMPKQQEIIYATFAQIEAAIDHRNDMLMSEIKNLKTL
CCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENRTLFVGNESKFPKGCRSCLLGTGLSAIRKTNKCNAECKFCYNYGELDDMFPIGEGMWE
CCCEEEEECCCCCCHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHH
IGGTKFYEKDIDLLLSIHKKPTGVSYVYLEPFMEIEKYYSVIKKFRDAQVYQHLYTNGTL
CCCCEEHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ATEETLKALGEAGLDEIRFNLGASNCSDKVIENIKIAKKYIKNVGIETPMTPEFFEAFFK
CHHHHHHHHHHCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KKQAILGTNLDFINCAELHLNENNIDNYYGENMYISRHGYISPIWSRELTLKFMKIADEE
HHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCC
NWDLVIHDCSNHTKFARDLNLSSKEGKWFGASNYGCEFPRIPYESFLPILRDDNFKFLSK
CCEEEEEECCCCHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHCCCHHCCCCCCCCCH
EELPEGYKAGKLIF
HCCCCCCCCCCCCC
>Mature Secondary Structure
MKISKKDALIWFEFFAMLPEEEEVMPKQQEIIYATFAQIEAAIDHRNDMLMSEIKNLKTL
CCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENRTLFVGNESKFPKGCRSCLLGTGLSAIRKTNKCNAECKFCYNYGELDDMFPIGEGMWE
CCCEEEEECCCCCCHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHH
IGGTKFYEKDIDLLLSIHKKPTGVSYVYLEPFMEIEKYYSVIKKFRDAQVYQHLYTNGTL
CCCCEEHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ATEETLKALGEAGLDEIRFNLGASNCSDKVIENIKIAKKYIKNVGIETPMTPEFFEAFFK
CHHHHHHHHHHCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KKQAILGTNLDFINCAELHLNENNIDNYYGENMYISRHGYISPIWSRELTLKFMKIADEE
HHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCC
NWDLVIHDCSNHTKFARDLNLSSKEGKWFGASNYGCEFPRIPYESFLPILRDDNFKFLSK
CCEEEEEECCCCHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHCCCHHCCCCCCCCCH
EELPEGYKAGKLIF
HCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA