Click here to switch to the map view.

The map label for this gene is trg [C]

Identifier: 153934557

GI number: 153934557

Start: 769902

End: 771914

Strand: Direct

Name: trg [C]

Synonym: CLC_0747

Alternate gene names: 153934557

Gene position: 769902-771914 (Clockwise)

Preceding gene: 153937640

Following gene: 153935749

Centisome position: 20.47

GC content: 30.65

Gene sequence:

>2013_bases
ATGAAATCATTGAAAACTAGATTAATAACTATATTTACAACAATTATATTTGTTTTGACAGTAGTACTAGGATTTATAGT
AGTAAATAGAGTTAGTAAAAATCTAACAGAGGATTATTATGATGATTTACAGAATTTGGCTGTAGAGAAGTCTAATTACA
TAAAATCTAAGATAGATAGTGAAATGTTTTATATAGAAGCTATAGCTCAAGATGATAAAATAATCAGTAAAGATATTTCT
TGGGAAAAGAAGGCGGATTATTTTGAGAAAGAGGCTAAAAGAGCAGGGTATATGTACTATTCCTATGTTGATAAAAATGG
AAACTCTACATTATTTAATAAAAAAAGAGATACTGTAAATGTTAAGGATAGAGATTATTACAAAAAGGCTATGTCAGGTA
AAGCAGCTATATCCGATATTATTATAAGTGCTGTAACAAAGAAGCCAACAATTATTGTGGCATCGCCTATTATAAAAAGC
GGTCAAATTCAGGGAGTTTTTTATGGAGCAAAGGAAGCAACTTTTTTAAGTGATATTGTTAGTAAAATTGAATATGGAAA
AACGGGCTTTGGTATTATTGTAAATGATAAGGGGACTACAGTTGGACATGCTAATAAAAAACTTGTTTTAAGTCAAAGTA
ATACTGTAGAAATTGCCAAAAAGGATCCATCTTTTAAAAGTTTAGCAGATTTAATAGAGAATATAATTTCACAAAAAAAG
GTTGGTAATGGAGAATATGAATATAAGGGAACAAAAAATGCGGTTGGTTTTTCTCCTATAGAAGGTACAAACTGGACTAT
GGTTTTTGGAGGAGAAATTTCTGAAGTATTAACTGATGTACATAGTATTAGAAATATTATTATAGTATTATCTTTAATGA
TAATAGTCATTGGAGCATTAGTTATTTATTTTATTAGTGGGACAGTAGTCAGCCCTATTATTGCTGTAACTAAAAGGATG
AATGAACTTTCTAATTTGAATTTTACTATATCTGGCAACGAGGATGCTATAAAATATCTTAATCGTAAAGATGAAATTGG
TAGTATGGCAAGGGCTGTAAGAAAGATGCGAGATAACGTCGCAGAGTTTATTACAAAGACTGATGAGTCAGCACAACAAA
TAGTAGCAACATCAGAGGAACTAACAGCTACATCACAGCAGTCAGCTACAGCCTCTGAAGAAGTTGCAAAGACTATAGAA
GATATAGCAAAGGGATCCGGCAATCAAGCGCAGGATACACAAAACTCTGCTTCAAGTGTAGAAGAAATGGGAAGTTTATT
AGAACAAAATAAAGAATATGTAAAAGAGTTAAACAATGCAGCCAAAGATATAGAGGATAGAAAAGAAGAAGGTTTTTCTA
TATTAAAAGAACTTATTGAAAAGACAAAAGAAAACAATGAGGCAGCTACAAATATATATGAGATTATATTAAGTAACAAT
AAAAGTGCAGAGAAAATAGATAGTGCTAGTTCAATGATTCAATCTATAGCGGATCAAACTAATTTGCTAGCTTTAAATGC
CGCAATAGAAGCAGCTAGAGCAGGAGAGCATGGAAAGGGTTTTGCAGTAGTAGCAGATGAAATTAGAAAACTTGCAGAAC
AATCAAATAGTTTTACAGAAGAAATAAAAAAAGTTATAGAGGAATTAAAGAAAAAATCTCAAAATGCAGTGGATAAAATG
GAAGAAGTAAAGGAAATAAACCAGTATCAATCAGAAAGTGTAAAGGGAACAGAAGAAAAATTTAAAAAAATAGCATACTC
TATAGATGTAACCAATAATGTTATAGAAAAACTTAATAAGTCTGAAGAAAAGATGAACCAAAATAAAGAAAAGCTTATGA
ATTTAATGCAAAATTTATCAGCTATAGCAGAAGAAAATGCAGCTGGAACAGAAGAAGCTTCAGCTTCCATAGAAGAGCAA
GCAGCAAGTATAGAAGAAATAGCTAATTCCAGCGAAGGATTAGCTCATATTGCAGAAGAATTAGATAGCTTAATTAAAAA
GTTTAAGGTATAA

Upstream 100 bases:

>100_bases
ATAATAATGAGATAAGTGTTATCAATTAGAATTAGAGGATAATTGTTACTTATATAGCATTAGAAGTGTATTTTATATTT
TAAGGGAGGAGAGGATTTTT

Downstream 100 bases:

>100_bases
AAATTAACTATTGGAAGGCAAGGATTATTCTTAATATCTGTAGTCATAATTTTGACTAAATTATTAGCATTAAGTCGAGT
TATTTATGCTCAACCTGTGG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 670; Mature: 670

Protein sequence:

>670_residues
MKSLKTRLITIFTTIIFVLTVVLGFIVVNRVSKNLTEDYYDDLQNLAVEKSNYIKSKIDSEMFYIEAIAQDDKIISKDIS
WEKKADYFEKEAKRAGYMYYSYVDKNGNSTLFNKKRDTVNVKDRDYYKKAMSGKAAISDIIISAVTKKPTIIVASPIIKS
GQIQGVFYGAKEATFLSDIVSKIEYGKTGFGIIVNDKGTTVGHANKKLVLSQSNTVEIAKKDPSFKSLADLIENIISQKK
VGNGEYEYKGTKNAVGFSPIEGTNWTMVFGGEISEVLTDVHSIRNIIIVLSLMIIVIGALVIYFISGTVVSPIIAVTKRM
NELSNLNFTISGNEDAIKYLNRKDEIGSMARAVRKMRDNVAEFITKTDESAQQIVATSEELTATSQQSATASEEVAKTIE
DIAKGSGNQAQDTQNSASSVEEMGSLLEQNKEYVKELNNAAKDIEDRKEEGFSILKELIEKTKENNEAATNIYEIILSNN
KSAEKIDSASSMIQSIADQTNLLALNAAIEAARAGEHGKGFAVVADEIRKLAEQSNSFTEEIKKVIEELKKKSQNAVDKM
EEVKEINQYQSESVKGTEEKFKKIAYSIDVTNNVIEKLNKSEEKMNQNKEKLMNLMQNLSAIAEENAAGTEEASASIEEQ
AASIEEIANSSEGLAHIAEELDSLIKKFKV

Sequences:

>Translated_670_residues
MKSLKTRLITIFTTIIFVLTVVLGFIVVNRVSKNLTEDYYDDLQNLAVEKSNYIKSKIDSEMFYIEAIAQDDKIISKDIS
WEKKADYFEKEAKRAGYMYYSYVDKNGNSTLFNKKRDTVNVKDRDYYKKAMSGKAAISDIIISAVTKKPTIIVASPIIKS
GQIQGVFYGAKEATFLSDIVSKIEYGKTGFGIIVNDKGTTVGHANKKLVLSQSNTVEIAKKDPSFKSLADLIENIISQKK
VGNGEYEYKGTKNAVGFSPIEGTNWTMVFGGEISEVLTDVHSIRNIIIVLSLMIIVIGALVIYFISGTVVSPIIAVTKRM
NELSNLNFTISGNEDAIKYLNRKDEIGSMARAVRKMRDNVAEFITKTDESAQQIVATSEELTATSQQSATASEEVAKTIE
DIAKGSGNQAQDTQNSASSVEEMGSLLEQNKEYVKELNNAAKDIEDRKEEGFSILKELIEKTKENNEAATNIYEIILSNN
KSAEKIDSASSMIQSIADQTNLLALNAAIEAARAGEHGKGFAVVADEIRKLAEQSNSFTEEIKKVIEELKKKSQNAVDKM
EEVKEINQYQSESVKGTEEKFKKIAYSIDVTNNVIEKLNKSEEKMNQNKEKLMNLMQNLSAIAEENAAGTEEASASIEEQ
AASIEEIANSSEGLAHIAEELDSLIKKFKV
>Mature_670_residues
MKSLKTRLITIFTTIIFVLTVVLGFIVVNRVSKNLTEDYYDDLQNLAVEKSNYIKSKIDSEMFYIEAIAQDDKIISKDIS
WEKKADYFEKEAKRAGYMYYSYVDKNGNSTLFNKKRDTVNVKDRDYYKKAMSGKAAISDIIISAVTKKPTIIVASPIIKS
GQIQGVFYGAKEATFLSDIVSKIEYGKTGFGIIVNDKGTTVGHANKKLVLSQSNTVEIAKKDPSFKSLADLIENIISQKK
VGNGEYEYKGTKNAVGFSPIEGTNWTMVFGGEISEVLTDVHSIRNIIIVLSLMIIVIGALVIYFISGTVVSPIIAVTKRM
NELSNLNFTISGNEDAIKYLNRKDEIGSMARAVRKMRDNVAEFITKTDESAQQIVATSEELTATSQQSATASEEVAKTIE
DIAKGSGNQAQDTQNSASSVEEMGSLLEQNKEYVKELNNAAKDIEDRKEEGFSILKELIEKTKENNEAATNIYEIILSNN
KSAEKIDSASSMIQSIADQTNLLALNAAIEAARAGEHGKGFAVVADEIRKLAEQSNSFTEEIKKVIEELKKKSQNAVDKM
EEVKEINQYQSESVKGTEEKFKKIAYSIDVTNNVIEKLNKSEEKMNQNKEKLMNLMQNLSAIAEENAAGTEEASASIEEQ
AASIEEIANSSEGLAHIAEELDSLIKKFKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=361, Percent_Identity=25.4847645429363, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI1789453, Length=376, Percent_Identity=26.3297872340426, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1788195, Length=250, Percent_Identity=28.4, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI2367378, Length=267, Percent_Identity=27.7153558052434, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788194, Length=255, Percent_Identity=29.4117647058824, Blast_Score=91, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 74160; Mature: 74160

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLKTRLITIFTTIIFVLTVVLGFIVVNRVSKNLTEDYYDDLQNLAVEKSNYIKSKIDS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EMFYIEAIAQDDKIISKDISWEKKADYFEKEAKRAGYMYYSYVDKNGNSTLFNKKRDTVN
HHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCC
VKDRDYYKKAMSGKAAISDIIISAVTKKPTIIVASPIIKSGQIQGVFYGAKEATFLSDIV
CCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHH
SKIEYGKTGFGIIVNDKGTTVGHANKKLVLSQSNTVEIAKKDPSFKSLADLIENIISQKK
HHHHCCCCCCEEEECCCCCEECCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHC
VGNGEYEYKGTKNAVGFSPIEGTNWTMVFGGEISEVLTDVHSIRNIIIVLSLMIIVIGAL
CCCCCEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIYFISGTVVSPIIAVTKRMNELSNLNFTISGNEDAIKYLNRKDEIGSMARAVRKMRDNV
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHH
AEFITKTDESAQQIVATSEELTATSQQSATASEEVAKTIEDIAKGSGNQAQDTQNSASSV
HHHHHHCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
EEMGSLLEQNKEYVKELNNAAKDIEDRKEEGFSILKELIEKTKENNEAATNIYEIILSNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
KSAEKIDSASSMIQSIADQTNLLALNAAIEAARAGEHGKGFAVVADEIRKLAEQSNSFTE
CCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHH
EIKKVIEELKKKSQNAVDKMEEVKEINQYQSESVKGTEEKFKKIAYSIDVTNNVIEKLNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SEEKMNQNKEKLMNLMQNLSAIAEENAAGTEEASASIEEQAASIEEIANSSEGLAHIAEE
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LDSLIKKFKV
HHHHHHHHCC
>Mature Secondary Structure
MKSLKTRLITIFTTIIFVLTVVLGFIVVNRVSKNLTEDYYDDLQNLAVEKSNYIKSKIDS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EMFYIEAIAQDDKIISKDISWEKKADYFEKEAKRAGYMYYSYVDKNGNSTLFNKKRDTVN
HHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCC
VKDRDYYKKAMSGKAAISDIIISAVTKKPTIIVASPIIKSGQIQGVFYGAKEATFLSDIV
CCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHH
SKIEYGKTGFGIIVNDKGTTVGHANKKLVLSQSNTVEIAKKDPSFKSLADLIENIISQKK
HHHHCCCCCCEEEECCCCCEECCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHC
VGNGEYEYKGTKNAVGFSPIEGTNWTMVFGGEISEVLTDVHSIRNIIIVLSLMIIVIGAL
CCCCCEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIYFISGTVVSPIIAVTKRMNELSNLNFTISGNEDAIKYLNRKDEIGSMARAVRKMRDNV
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHH
AEFITKTDESAQQIVATSEELTATSQQSATASEEVAKTIEDIAKGSGNQAQDTQNSASSV
HHHHHHCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
EEMGSLLEQNKEYVKELNNAAKDIEDRKEEGFSILKELIEKTKENNEAATNIYEIILSNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
KSAEKIDSASSMIQSIADQTNLLALNAAIEAARAGEHGKGFAVVADEIRKLAEQSNSFTE
CCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHH
EIKKVIEELKKKSQNAVDKMEEVKEINQYQSESVKGTEEKFKKIAYSIDVTNNVIEKLNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SEEKMNQNKEKLMNLMQNLSAIAEENAAGTEEASASIEEQAASIEEIANSSEGLAHIAEE
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LDSLIKKFKV
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA