| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is 153934498
Identifier: 153934498
GI number: 153934498
Start: 821329
End: 822033
Strand: Direct
Name: 153934498
Synonym: CLC_0799
Alternate gene names: NA
Gene position: 821329-822033 (Clockwise)
Preceding gene: 153937575
Following gene: 153936031
Centisome position: 21.84
GC content: 29.65
Gene sequence:
>705_bases ATGTATATCATAAATTCAAATTTAGATTTTAGTGGATTAACCTATGGTAATAATCCTAAAATGATTATATTACATCATGC AGAAGCCTCAGGATGTAGCATACAAGATATTCATTCATGGCACTTAAATAATGGTTGGAGTGGTTGTGGATATAATTATT TTATAAAGAAGGATGGCTCTATTTATAAAGGTAGACCAGATAATGCTATAGGTGCTCATTGCTTAAGTTATAATGGCGTG TCTATTGGTATTTGTATGGAAGGTAGATTTAATGTAGAGGAAGTGGGTAACTCTCAATATAATTCTTTAAAGGAGTTAAT CTGCTACTTACAAAATAAATATAATATAAATAAAATATATGCACATAGAGAATTAAATCAAACAGATTGCCCAGGAAACA ACTTTCCTCTAAGTAGAATAAAAAAAGAGTGTTTAGGCGGGGATAATTCAATAGAGAGTTCAAGTAAACAAAATAAAAAT TATCCTGGATATTTACTTAAATATAACCCTAATAGATTTGATGGTAATGTAAAAGTAATACAAAGTAAATTACAGAATAT AGGCTATAGTGTAGGTAAGTTTGGAGTTGATGGATATTTTGGAGATGGTACATTATTGGCTGTTAAGTGCTTTCAAAGGG ATTGTAATTTGATGATAGATGGAATTGTTGGAGAAAATACGTGGAATAGAATAATGAGGGAATAA
Upstream 100 bases:
>100_bases GATTAGATGAAGTTTCATTAGAATAATTATTTTTATTTGTTGGAACAGTAATAAAATAATCTTTAATAATTTTATAAATT TATATAAAGGGGGAACAGCT
Downstream 100 bases:
>100_bases AATATGTATTTATTTAGATGAAAAAAGAAGATTGATCTAATTTACAAAATGCTTAATTTTAAGTATTCCTTTAGGGTCAC CTACGCACCAAAGAAGATTA
Product: N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: Prophage; Negative Regulator Of Beta-Lactamase Expression; Phage Related N-Acetylmuramoyl-L-Alanine Amidase
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MYIINSNLDFSGLTYGNNPKMIILHHAEASGCSIQDIHSWHLNNGWSGCGYNYFIKKDGSIYKGRPDNAIGAHCLSYNGV SIGICMEGRFNVEEVGNSQYNSLKELICYLQNKYNINKIYAHRELNQTDCPGNNFPLSRIKKECLGGDNSIESSSKQNKN YPGYLLKYNPNRFDGNVKVIQSKLQNIGYSVGKFGVDGYFGDGTLLAVKCFQRDCNLMIDGIVGENTWNRIMRE
Sequences:
>Translated_234_residues MYIINSNLDFSGLTYGNNPKMIILHHAEASGCSIQDIHSWHLNNGWSGCGYNYFIKKDGSIYKGRPDNAIGAHCLSYNGV SIGICMEGRFNVEEVGNSQYNSLKELICYLQNKYNINKIYAHRELNQTDCPGNNFPLSRIKKECLGGDNSIESSSKQNKN YPGYLLKYNPNRFDGNVKVIQSKLQNIGYSVGKFGVDGYFGDGTLLAVKCFQRDCNLMIDGIVGENTWNRIMRE >Mature_234_residues MYIINSNLDFSGLTYGNNPKMIILHHAEASGCSIQDIHSWHLNNGWSGCGYNYFIKKDGSIYKGRPDNAIGAHCLSYNGV SIGICMEGRFNVEEVGNSQYNSLKELICYLQNKYNINKIYAHRELNQTDCPGNNFPLSRIKKECLGGDNSIESSSKQNKN YPGYLLKYNPNRFDGNVKVIQSKLQNIGYSVGKFGVDGYFGDGTLLAVKCFQRDCNLMIDGIVGENTWNRIMRE
Specific function: Unknown
COG id: COG3409
COG function: function code M; Putative peptidoglycan-binding domain-containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24651867, Length=125, Percent_Identity=32.8, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24651865, Length=132, Percent_Identity=30.3030303030303, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24586649, Length=132, Percent_Identity=30.3030303030303, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24645946, Length=132, Percent_Identity=34.0909090909091, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI21356551, Length=132, Percent_Identity=34.0909090909091, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24645949, Length=132, Percent_Identity=34.0909090909091, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI281365921, Length=126, Percent_Identity=29.3650793650794, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI45551539, Length=126, Percent_Identity=29.3650793650794, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574426, Length=129, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI281365923, Length=126, Percent_Identity=29.3650793650794, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26343; Mature: 26343
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIINSNLDFSGLTYGNNPKMIILHHAEASGCSIQDIHSWHLNNGWSGCGYNYFIKKDGS CEEECCCCCCCCEEECCCCCEEEEEECCCCCCCHHHHHEEECCCCCCCCCEEEEEECCCC IYKGRPDNAIGAHCLSYNGVSIGICMEGRFNVEEVGNSQYNSLKELICYLQNKYNINKIY EECCCCCCCCCCEEEECCCEEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEE AHRELNQTDCPGNNFPLSRIKKECLGGDNSIESSSKQNKNYPGYLLKYNPNRFDGNVKVI EECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHH QSKLQNIGYSVGKFGVDGYFGDGTLLAVKCFQRDCNLMIDGIVGENTWNRIMRE HHHHHHCCCCHHCCCCCCEECCCCEEEEEEHHCCCCEEEEEEECCCHHHHHHCC >Mature Secondary Structure MYIINSNLDFSGLTYGNNPKMIILHHAEASGCSIQDIHSWHLNNGWSGCGYNYFIKKDGS CEEECCCCCCCCEEECCCCCEEEEEECCCCCCCHHHHHEEECCCCCCCCCEEEEEECCCC IYKGRPDNAIGAHCLSYNGVSIGICMEGRFNVEEVGNSQYNSLKELICYLQNKYNINKIY EECCCCCCCCCCEEEECCCEEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEE AHRELNQTDCPGNNFPLSRIKKECLGGDNSIESSSKQNKNYPGYLLKYNPNRFDGNVKVI EECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHH QSKLQNIGYSVGKFGVDGYFGDGTLLAVKCFQRDCNLMIDGIVGENTWNRIMRE HHHHHHCCCCHHCCCCCCEECCCCEEEEEEHHCCCCEEEEEEECCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA