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The map label for this gene is ygaY [H]

Identifier: 153934469

GI number: 153934469

Start: 3689528

End: 3690754

Strand: Reverse

Name: ygaY [H]

Synonym: CLC_3551

Alternate gene names: 153934469

Gene position: 3690754-3689528 (Counterclockwise)

Preceding gene: 153936193

Following gene: 153935789

Centisome position: 98.14

GC content: 31.87

Gene sequence:

>1227_bases
GTGTATCAATCAAATAACAAGTTTATAAAAACAAATTCATCAATAAATAATCTTCAAGCTAAACCCATATTGACTAATTT
ATTAATTTTAGTTATGTCTATAGCTTGTGGACTTACTGTAGCAAATTTATATTATATCCAACCACTCTTAGCTGATATAG
CAAAAACCTTTCATGTCAGCCAATTAAGCATAGGCTTTGCAGCTATGCTTACACAAATAGGTTATGCAATTGGAATGATA
TTTATATTGCCTTTGGGAGATATAAAAGAAAAGAGAAAATTAATAGTAATAATGCTTTTATGCTCAATAATCTCACTTAT
GAGTATGTTCTTCGCTTCAAATATATATATTCTTACAATTTCTTCCTTTGCCGTTGGATTTACTTCTATTATTCCTCAAC
TTATTATCACTTTAGCAGCACAACTATCAACTCCACAGCAAAGAGGGCAAACTATTGGTACAATAATGAGCGGCTTGTTA
ATCGGAATATTACTTTCTCGTACAATCGGCGGCATCTTAGGCGGCTACTTTGGCTGGAGAGCAGTTTATCTTATTGCAGC
GATTATGATGCTTACTCTCATGCTTATTCTTAGGAAGTTGATACCCTTATGCGAACCTATCTCTGACATTAAATATACTC
AACTGTTAAAATCAATGATACACTTAATAAAAACTGAACAAATTTTAAGAGAAGCCTCTATTAATGGTGCTTTAATGTTC
TCAGCTTTTAGTGCCTTTTGGACATCCCTCATATTTTTACTTGAAAGTTCTTATTATAATATAGGAGCTGAAGCAGCAGG
TTTATTTGGATTAGTTGGTATTATTGGTGCTCTTGCTGCTCCAATAGTTGGAAAATTAGCTGACAAAAAGGGTTCAAGAT
TTGCTATAGATATATGTATAATCGTAGTTATAATTGCTTATTTATTCTTCTTTCTATTTGGCTTTAAAATTTGGGGACTT
ATTTTAGGAATCATTCTTCTAGATTTAGGAGTACAATCCTGTAATGTTTCTAATCAAGCAAGAGTACATTTTTTAAACGA
AGAAACACGTAATAGACTTAATACTGTTTATATGGTCAGCTTTTTTCTCGGAGGAGCATTAGGTTCCTTTTTAGGTTCCT
ATAGTTACTCTCATTTTGGATGGTATGGAGTGTGTACTTTTGGAATGGCAACTCAAATTATAGCAATTATTCTACACAAG
GTTGAAAAAAAGCATAAAATATATTAA

Upstream 100 bases:

>100_bases
ATGAAAAAGGAGCTATCAAAAATCCAGAAAGAGAAGAAAAGATTTTTACTAATTTTATTCGATGAAATATATTATTATAA
TCTAAGGAGGTGATTTATAA

Downstream 100 bases:

>100_bases
TTTTAGGGAAAAATAGTCCAAAAGGAGTTTGGCCAAAAACTGTATTATCTATGGTCATTGTGTAGCTATCTGCCCAAGAG
AAGCTATTGATAATAAAAGA

Product: major facilitator family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MYQSNNKFIKTNSSINNLQAKPILTNLLILVMSIACGLTVANLYYIQPLLADIAKTFHVSQLSIGFAAMLTQIGYAIGMI
FILPLGDIKEKRKLIVIMLLCSIISLMSMFFASNIYILTISSFAVGFTSIIPQLIITLAAQLSTPQQRGQTIGTIMSGLL
IGILLSRTIGGILGGYFGWRAVYLIAAIMMLTLMLILRKLIPLCEPISDIKYTQLLKSMIHLIKTEQILREASINGALMF
SAFSAFWTSLIFLLESSYYNIGAEAAGLFGLVGIIGALAAPIVGKLADKKGSRFAIDICIIVVIIAYLFFFLFGFKIWGL
ILGIILLDLGVQSCNVSNQARVHFLNEETRNRLNTVYMVSFFLGGALGSFLGSYSYSHFGWYGVCTFGMATQIIAIILHK
VEKKHKIY

Sequences:

>Translated_408_residues
MYQSNNKFIKTNSSINNLQAKPILTNLLILVMSIACGLTVANLYYIQPLLADIAKTFHVSQLSIGFAAMLTQIGYAIGMI
FILPLGDIKEKRKLIVIMLLCSIISLMSMFFASNIYILTISSFAVGFTSIIPQLIITLAAQLSTPQQRGQTIGTIMSGLL
IGILLSRTIGGILGGYFGWRAVYLIAAIMMLTLMLILRKLIPLCEPISDIKYTQLLKSMIHLIKTEQILREASINGALMF
SAFSAFWTSLIFLLESSYYNIGAEAAGLFGLVGIIGALAAPIVGKLADKKGSRFAIDICIIVVIIAYLFFFLFGFKIWGL
ILGIILLDLGVQSCNVSNQARVHFLNEETRNRLNTVYMVSFFLGGALGSFLGSYSYSHFGWYGVCTFGMATQIIAIILHK
VEKKHKIY
>Mature_408_residues
MYQSNNKFIKTNSSINNLQAKPILTNLLILVMSIACGLTVANLYYIQPLLADIAKTFHVSQLSIGFAAMLTQIGYAIGMI
FILPLGDIKEKRKLIVIMLLCSIISLMSMFFASNIYILTISSFAVGFTSIIPQLIITLAAQLSTPQQRGQTIGTIMSGLL
IGILLSRTIGGILGGYFGWRAVYLIAAIMMLTLMLILRKLIPLCEPISDIKYTQLLKSMIHLIKTEQILREASINGALMF
SAFSAFWTSLIFLLESSYYNIGAEAAGLFGLVGIIGALAAPIVGKLADKKGSRFAIDICIIVVIIAYLFFFLFGFKIWGL
ILGIILLDLGVQSCNVSNQARVHFLNEETRNRLNTVYMVSFFLGGALGSFLGSYSYSHFGWYGVCTFGMATQIIAIILHK
VEKKHKIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=371, Percent_Identity=23.4501347708895, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44932; Mature: 44932

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQSNNKFIKTNSSINNLQAKPILTNLLILVMSIACGLTVANLYYIQPLLADIAKTFHVS
CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLSIGFAAMLTQIGYAIGMIFILPLGDIKEKRKLIVIMLLCSIISLMSMFFASNIYILTI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEH
SSFAVGFTSIIPQLIITLAAQLSTPQQRGQTIGTIMSGLLIGILLSRTIGGILGGYFGWR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVYLIAAIMMLTLMLILRKLIPLCEPISDIKYTQLLKSMIHLIKTEQILREASINGALMF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SAFSAFWTSLIFLLESSYYNIGAEAAGLFGLVGIIGALAAPIVGKLADKKGSRFAIDICI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
IVVIIAYLFFFLFGFKIWGLILGIILLDLGVQSCNVSNQARVHFLNEETRNRLNTVYMVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHEEECCHHHHHHHHHHHHHH
FFLGGALGSFLGSYSYSHFGWYGVCTFGMATQIIAIILHKVEKKHKIY
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYQSNNKFIKTNSSINNLQAKPILTNLLILVMSIACGLTVANLYYIQPLLADIAKTFHVS
CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLSIGFAAMLTQIGYAIGMIFILPLGDIKEKRKLIVIMLLCSIISLMSMFFASNIYILTI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEH
SSFAVGFTSIIPQLIITLAAQLSTPQQRGQTIGTIMSGLLIGILLSRTIGGILGGYFGWR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVYLIAAIMMLTLMLILRKLIPLCEPISDIKYTQLLKSMIHLIKTEQILREASINGALMF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SAFSAFWTSLIFLLESSYYNIGAEAAGLFGLVGIIGALAAPIVGKLADKKGSRFAIDICI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
IVVIIAYLFFFLFGFKIWGLILGIILLDLGVQSCNVSNQARVHFLNEETRNRLNTVYMVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHEEECCHHHHHHHHHHHHHH
FFLGGALGSFLGSYSYSHFGWYGVCTFGMATQIIAIILHKVEKKHKIY
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]