| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153933570
Identifier: 153933570
GI number: 153933570
Start: 3300363
End: 3301241
Strand: Reverse
Name: 153933570
Synonym: CLB_3154
Alternate gene names: NA
Gene position: 3301241-3300363 (Counterclockwise)
Preceding gene: 153932779
Following gene: 153932527
Centisome position: 85.45
GC content: 31.85
Gene sequence:
>879_bases ATGGCTATTAATTCAAAAGATTTTATTCCACGTCCAGGTTTTGTAAATAAACAAGGTTGTTTACCAGATCCAGTGGAGAT AACTTGTATTCAAGTACCTAAAGTTTTTGATCAATGTTTAATAAAAGAATGTTTAAAACCTACAGATGATTGCGAACAGT TATGTAAACAGATACCAAATGTTACGGAACCAGCGCAAGTTAGATGCGTGGGTTGTTGTAAAGACTTAAAAGTAAAGGTT AATTCTGTTACTAAATGCCCTGTTTCAAATGGTAAACCTGGACACAAGAAAATAACTATTAATTTTACAGTTACTTTTGA TGTAGATGTAGAGGTGAAAAAAAATGGAGTTAAACACACAGAAACATTAAAATATTCAGTAAATAGAACTATAACTGCTC CTAATTTGTATTGTCCAGATGCTATAGCTAAAACTATAATGGGTAAAGAATGTACATCAGCAGAAGAAGTTGATCAGCAG TTTATAAAACTAGAAGTGGTAGGGGAGTGCCTAAGTACAGATATTACAAAGGTAGATTGTGATAAGGATTGTTGCAGTTG TACTTGTACTTGTGAAGAGGATGAAGATAAGAAAGTATTCTTATGTATCACATTAGGATTATTTATAATAGTCAAATGTG AAATAGTAGTTCAATTAATGGTTCCAGCTTATGGCTATTGCCCAGTACCAGAAGAATGTAAGTGCTCACATGATCCATGT AAAGAATTTATGGAAAGAGAACTTCCAACTCTTTATCCACCACAAGAAATGGATAATTTATTTGATGATTGTGATGAGAA ATGCATTGAAGAAGAAGAAAAAGACGATATGGTAAGTAATAGTATAGTAAGTAGCAGTAGTATAATAAGTAGTAATTAA
Upstream 100 bases:
>100_bases ATTAAAATATATTTTTACTTATCACACTTATTTTTTTATATGCATACTATATATTGAGATAAAACAAGGTTTCTTCTATA TGAAAAGGAGGATATTTAAT
Downstream 100 bases:
>100_bases TCTATAAGTTAAAATTAATATAAGAATTATTTTAATGGTATTTATCATATTGGTTTATTTTATATTATGGATTCTTATGC TATAAATACATTAAGAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MAINSKDFIPRPGFVNKQGCLPDPVEITCIQVPKVFDQCLIKECLKPTDDCEQLCKQIPNVTEPAQVRCVGCCKDLKVKV NSVTKCPVSNGKPGHKKITINFTVTFDVDVEVKKNGVKHTETLKYSVNRTITAPNLYCPDAIAKTIMGKECTSAEEVDQQ FIKLEVVGECLSTDITKVDCDKDCCSCTCTCEEDEDKKVFLCITLGLFIIVKCEIVVQLMVPAYGYCPVPEECKCSHDPC KEFMERELPTLYPPQEMDNLFDDCDEKCIEEEEKDDMVSNSIVSSSSIISSN
Sequences:
>Translated_292_residues MAINSKDFIPRPGFVNKQGCLPDPVEITCIQVPKVFDQCLIKECLKPTDDCEQLCKQIPNVTEPAQVRCVGCCKDLKVKV NSVTKCPVSNGKPGHKKITINFTVTFDVDVEVKKNGVKHTETLKYSVNRTITAPNLYCPDAIAKTIMGKECTSAEEVDQQ FIKLEVVGECLSTDITKVDCDKDCCSCTCTCEEDEDKKVFLCITLGLFIIVKCEIVVQLMVPAYGYCPVPEECKCSHDPC KEFMERELPTLYPPQEMDNLFDDCDEKCIEEEEKDDMVSNSIVSSSSIISSN >Mature_291_residues AINSKDFIPRPGFVNKQGCLPDPVEITCIQVPKVFDQCLIKECLKPTDDCEQLCKQIPNVTEPAQVRCVGCCKDLKVKVN SVTKCPVSNGKPGHKKITINFTVTFDVDVEVKKNGVKHTETLKYSVNRTITAPNLYCPDAIAKTIMGKECTSAEEVDQQF IKLEVVGECLSTDITKVDCDKDCCSCTCTCEEDEDKKVFLCITLGLFIIVKCEIVVQLMVPAYGYCPVPEECKCSHDPCK EFMERELPTLYPPQEMDNLFDDCDEKCIEEEEKDDMVSNSIVSSSSIISSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32575; Mature: 32444
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 11.3 %Cys+Met (Translated Protein) 9.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 11.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINSKDFIPRPGFVNKQGCLPDPVEITCIQVPKVFDQCLIKECLKPTDDCEQLCKQIPN CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHCCC VTEPAQVRCVGCCKDLKVKVNSVTKCPVSNGKPGHKKITINFTVTFDVDVEVKKNGVKHT CCCCHHEEEEECCCCCEEEECCEEECCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCH ETLKYSVNRTITAPNLYCPDAIAKTIMGKECTSAEEVDQQFIKLEVVGECLSTDITKVDC HEEEEECCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC DKDCCSCTCTCEEDEDKKVFLCITLGLFIIVKCEIVVQLMVPAYGYCPVPEECKCSHDPC CCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHH KEFMERELPTLYPPQEMDNLFDDCDEKCIEEEEKDDMVSNSIVSSSSIISSN HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AINSKDFIPRPGFVNKQGCLPDPVEITCIQVPKVFDQCLIKECLKPTDDCEQLCKQIPN CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHCCC VTEPAQVRCVGCCKDLKVKVNSVTKCPVSNGKPGHKKITINFTVTFDVDVEVKKNGVKHT CCCCHHEEEEECCCCCEEEECCEEECCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCH ETLKYSVNRTITAPNLYCPDAIAKTIMGKECTSAEEVDQQFIKLEVVGECLSTDITKVDC HEEEEECCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC DKDCCSCTCTCEEDEDKKVFLCITLGLFIIVKCEIVVQLMVPAYGYCPVPEECKCSHDPC CCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHH KEFMERELPTLYPPQEMDNLFDDCDEKCIEEEEKDDMVSNSIVSSSSIISSN HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA