Click here to switch to the map view.

The map label for this gene is mcpB [H]

Identifier: 153933201

GI number: 153933201

Start: 2889486

End: 2891546

Strand: Reverse

Name: mcpB [H]

Synonym: CLB_2754

Alternate gene names: 153933201

Gene position: 2891546-2889486 (Counterclockwise)

Preceding gene: 153934241

Following gene: 153932203

Centisome position: 74.84

GC content: 33.33

Gene sequence:

>2061_bases
ATGAAAGTTAAAAGCATTGTCCAAAAGAGTATCTTTGCCAAAATGATGTTGTATATTCTCACAGCAGTATTTGTTGTATT
TTTAGCATCTGGTATTTTTTTAGAGCTAAAGATCAAAGATATTGTGACTAAAATGAATTATGAGCATCTTTTGACGGAAG
CAAAGGCAGCTTCTAATCAAAACAATGAATTTTTTAAAAAGAATGAAGTATTAGTAAGACAGATGGCAACTAACCAAGAT
ATTATAAAATTAATGAAAGGTGTAAGAACTAGGGATAAAGTTCGAAGTCATCCAGATTATAAAGATGTAATAAACTCTTT
ACAACAAATAAAAAAGATAGATAAAAATCTTGCTATGGTATGGATTGGTCTACAGGATGCTAGTTATTTAGTTACTCAAG
ATCAATGGGACTCTCCAACAGATTGGATTATTAAGGAAAAGCCTTGGTATAAAGAAGCTTTAAAATTAAAACCTGGGGAA
GTGCTTTACACAGAACCTTATGTAGATTCTGTAACAGGAAAGATGGTAATTAGTGTTATACAGGTAGTATATGATGAGAA
AGGAACTAGTTTAGGCGTAGTGGCTATAGATGTACTATTTGATGAATTACCTAGTATTATGCAGAAATATAAGATTGGTG
AAAGTGGTTTTGTATTCCTAATAAGTAAAAAAGGTGAACTAGCTTATCACCCTGTAAAAGAAATGGTTTTAAAAAATAAT
ATGACAAAAGAAAAAGGTGAAATGGGAGACATAGGAAGAAATATGGTTGCACAAAAGCAGGGCACAGGAATGTATTCTTA
TAAAGATCAGCATAAATATGTAGGGTATTATCCTATATCCGCTAATGGATGGTCTGTTGCAGCCGTAATAGACCAAAGTG
AATTTAATGAAAAAGTTTCTATGGTAAGAAACCTACTTATTATCTCCTATGCATTAGGAGCAATTATTATTGCAGCGCTA
ATTTATCTAGTAGGGAAAGCTATAGTAAAACCTATTAAAAGTCTTGAAGGATATGGACATAAAATGGCAGACCTAGATTT
TACAGAAGATATATCAAGGGAGCTAGTGGAAAAGGAAGATGAAATAGGATTATTAGCAAAGGCTTTTGAAAATGTTTCTG
TAAATCTAAGAGATTTTGCTAGAAAAACTTTAGAAAGTGCAGAGCAGGTAGCAGCCTCATCAGAGGAGCTTACCTCTACT
AGTCAACAAACTGCAGAAGCAGCAAATGAAATTACTAAAACTATAGAGGAAATGGCTAATTCTGCAGAAGATCAAGCAAG
GCAAACAGAAAGTGGTGCTGTCAATGTAAATGTCCTTGGAGAGACAATTACAAAAAATCAACAGATGATGGATAGTTTAA
ATAAGGCTATAAAAAAAGTAGATATGTTAAAAAATGAAGGGGTAACTACTTTAAAAGAACTAGTAGAAAAAACTATGGAC
AGTGAAAAGATATCAAAGGAAGTATATAAGGTAATTATTGATAGCAATAAGAGTGCAGAAAAAATTGAAAATGCTAGCGA
GATGATAAAAAGTATAGCATCTCAGACTAATCTTTTAGCTTTAAATGCAGCTATTGAGGCAGCAAGGGCAGGAGAATCAG
GTAAAGGTTTTGCTGTGGTAGCAGACGAAATAAGAAAGTTAGCAGAGCAATCTAATGCTTTCACCGATGAAATTGCTTTG
GTAATTAATGAATTAGCAGTTCAGACAGAAAAAGCAGTTGGGAGTATGGAAATAGTCAGTGATAATACGAAAGAGCAAAC
TAAGGGCGTAGAAAACACAAATAAAAAATTTGAAGGTATTTCTATAGCTATTGATGAAATGCAGGAAGTAGTACAAACAT
TAAATGAATCAGGAAAGGATATGGAAAGCAAGAAGAGCGAAATCATTACAGTAATTGATAATTTATCTGCTATTTCCAAG
GAAAATGCTGCGGGGACAGAAGAGACAGTAGCTGCAGTAGAAGAACAAACCGCTTCTATCTCGGAGTTAGCTAATGCCAG
TGAGTCTTTAGCTAAGTTAGCAGAAGACATGCAGGTTAATATTTCTAGGTTTAGATATTAA

Upstream 100 bases:

>100_bases
TATTTTCTGATATATAATGAAAATAGTAAAAAATAATGGTATAAAATCTAGTAAAAAAGGGGAGGAAACAGGATTTTACC
AATATAGAGGGGGAGAATAA

Downstream 100 bases:

>100_bases
ATATCTTTAAATTGAGTATTACATGGGCTGAATAGTATTTTAAACAAATATTATTCAGCTTATTTTCATCTAATGGATGG
GATGGAAAAATCAATAAAAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: H3 [H]

Number of amino acids: Translated: 686; Mature: 686

Protein sequence:

>686_residues
MKVKSIVQKSIFAKMMLYILTAVFVVFLASGIFLELKIKDIVTKMNYEHLLTEAKAASNQNNEFFKKNEVLVRQMATNQD
IIKLMKGVRTRDKVRSHPDYKDVINSLQQIKKIDKNLAMVWIGLQDASYLVTQDQWDSPTDWIIKEKPWYKEALKLKPGE
VLYTEPYVDSVTGKMVISVIQVVYDEKGTSLGVVAIDVLFDELPSIMQKYKIGESGFVFLISKKGELAYHPVKEMVLKNN
MTKEKGEMGDIGRNMVAQKQGTGMYSYKDQHKYVGYYPISANGWSVAAVIDQSEFNEKVSMVRNLLIISYALGAIIIAAL
IYLVGKAIVKPIKSLEGYGHKMADLDFTEDISRELVEKEDEIGLLAKAFENVSVNLRDFARKTLESAEQVAASSEELTST
SQQTAEAANEITKTIEEMANSAEDQARQTESGAVNVNVLGETITKNQQMMDSLNKAIKKVDMLKNEGVTTLKELVEKTMD
SEKISKEVYKVIIDSNKSAEKIENASEMIKSIASQTNLLALNAAIEAARAGESGKGFAVVADEIRKLAEQSNAFTDEIAL
VINELAVQTEKAVGSMEIVSDNTKEQTKGVENTNKKFEGISIAIDEMQEVVQTLNESGKDMESKKSEIITVIDNLSAISK
ENAAGTEETVAAVEEQTASISELANASESLAKLAEDMQVNISRFRY

Sequences:

>Translated_686_residues
MKVKSIVQKSIFAKMMLYILTAVFVVFLASGIFLELKIKDIVTKMNYEHLLTEAKAASNQNNEFFKKNEVLVRQMATNQD
IIKLMKGVRTRDKVRSHPDYKDVINSLQQIKKIDKNLAMVWIGLQDASYLVTQDQWDSPTDWIIKEKPWYKEALKLKPGE
VLYTEPYVDSVTGKMVISVIQVVYDEKGTSLGVVAIDVLFDELPSIMQKYKIGESGFVFLISKKGELAYHPVKEMVLKNN
MTKEKGEMGDIGRNMVAQKQGTGMYSYKDQHKYVGYYPISANGWSVAAVIDQSEFNEKVSMVRNLLIISYALGAIIIAAL
IYLVGKAIVKPIKSLEGYGHKMADLDFTEDISRELVEKEDEIGLLAKAFENVSVNLRDFARKTLESAEQVAASSEELTST
SQQTAEAANEITKTIEEMANSAEDQARQTESGAVNVNVLGETITKNQQMMDSLNKAIKKVDMLKNEGVTTLKELVEKTMD
SEKISKEVYKVIIDSNKSAEKIENASEMIKSIASQTNLLALNAAIEAARAGESGKGFAVVADEIRKLAEQSNAFTDEIAL
VINELAVQTEKAVGSMEIVSDNTKEQTKGVENTNKKFEGISIAIDEMQEVVQTLNESGKDMESKKSEIITVIDNLSAISK
ENAAGTEETVAAVEEQTASISELANASESLAKLAEDMQVNISRFRY
>Mature_686_residues
MKVKSIVQKSIFAKMMLYILTAVFVVFLASGIFLELKIKDIVTKMNYEHLLTEAKAASNQNNEFFKKNEVLVRQMATNQD
IIKLMKGVRTRDKVRSHPDYKDVINSLQQIKKIDKNLAMVWIGLQDASYLVTQDQWDSPTDWIIKEKPWYKEALKLKPGE
VLYTEPYVDSVTGKMVISVIQVVYDEKGTSLGVVAIDVLFDELPSIMQKYKIGESGFVFLISKKGELAYHPVKEMVLKNN
MTKEKGEMGDIGRNMVAQKQGTGMYSYKDQHKYVGYYPISANGWSVAAVIDQSEFNEKVSMVRNLLIISYALGAIIIAAL
IYLVGKAIVKPIKSLEGYGHKMADLDFTEDISRELVEKEDEIGLLAKAFENVSVNLRDFARKTLESAEQVAASSEELTST
SQQTAEAANEITKTIEEMANSAEDQARQTESGAVNVNVLGETITKNQQMMDSLNKAIKKVDMLKNEGVTTLKELVEKTMD
SEKISKEVYKVIIDSNKSAEKIENASEMIKSIASQTNLLALNAAIEAARAGESGKGFAVVADEIRKLAEQSNAFTDEIAL
VINELAVQTEKAVGSMEIVSDNTKEQTKGVENTNKKFEGISIAIDEMQEVVQTLNESGKDMESKKSEIITVIDNLSAISK
ENAAGTEETVAAVEEQTASISELANASESLAKLAEDMQVNISRFRY

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=369, Percent_Identity=27.6422764227642, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1787690, Length=364, Percent_Identity=26.6483516483516, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI2367378, Length=381, Percent_Identity=24.9343832020997, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1788195, Length=315, Percent_Identity=27.6190476190476, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1788194, Length=129, Percent_Identity=37.984496124031, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 76161; Mature: 76161

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKSIVQKSIFAKMMLYILTAVFVVFLASGIFLELKIKDIVTKMNYEHLLTEAKAASNQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCC
NNEFFKKNEVLVRQMATNQDIIKLMKGVRTRDKVRSHPDYKDVINSLQQIKKIDKNLAMV
CCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEE
WIGLQDASYLVTQDQWDSPTDWIIKEKPWYKEALKLKPGEVLYTEPYVDSVTGKMVISVI
EEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHH
QVVYDEKGTSLGVVAIDVLFDELPSIMQKYKIGESGFVFLISKKGELAYHPVKEMVLKNN
HHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCC
MTKEKGEMGDIGRNMVAQKQGTGMYSYKDQHKYVGYYPISANGWSVAAVIDQSEFNEKVS
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECHHHHHHHHH
MVRNLLIISYALGAIIIAALIYLVGKAIVKPIKSLEGYGHKMADLDFTEDISRELVEKED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCH
EIGLLAKAFENVSVNLRDFARKTLESAEQVAASSEELTSTSQQTAEAANEITKTIEEMAN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAEDQARQTESGAVNVNVLGETITKNQQMMDSLNKAIKKVDMLKNEGVTTLKELVEKTMD
HHHHHHHHHCCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
SEKISKEVYKVIIDSNKSAEKIENASEMIKSIASQTNLLALNAAIEAARAGESGKGFAVV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCHHHH
ADEIRKLAEQSNAFTDEIALVINELAVQTEKAVGSMEIVSDNTKEQTKGVENTNKKFEGI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCCCCCCCCCCCCH
SIAIDEMQEVVQTLNESGKDMESKKSEIITVIDNLSAISKENAAGTEETVAAVEEQTASI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
SELANASESLAKLAEDMQVNISRFRY
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVKSIVQKSIFAKMMLYILTAVFVVFLASGIFLELKIKDIVTKMNYEHLLTEAKAASNQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCC
NNEFFKKNEVLVRQMATNQDIIKLMKGVRTRDKVRSHPDYKDVINSLQQIKKIDKNLAMV
CCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEE
WIGLQDASYLVTQDQWDSPTDWIIKEKPWYKEALKLKPGEVLYTEPYVDSVTGKMVISVI
EEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHH
QVVYDEKGTSLGVVAIDVLFDELPSIMQKYKIGESGFVFLISKKGELAYHPVKEMVLKNN
HHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCC
MTKEKGEMGDIGRNMVAQKQGTGMYSYKDQHKYVGYYPISANGWSVAAVIDQSEFNEKVS
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECHHHHHHHHH
MVRNLLIISYALGAIIIAALIYLVGKAIVKPIKSLEGYGHKMADLDFTEDISRELVEKED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCH
EIGLLAKAFENVSVNLRDFARKTLESAEQVAASSEELTSTSQQTAEAANEITKTIEEMAN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAEDQARQTESGAVNVNVLGETITKNQQMMDSLNKAIKKVDMLKNEGVTTLKELVEKTMD
HHHHHHHHHCCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
SEKISKEVYKVIIDSNKSAEKIENASEMIKSIASQTNLLALNAAIEAARAGESGKGFAVV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCHHHH
ADEIRKLAEQSNAFTDEIALVINELAVQTEKAVGSMEIVSDNTKEQTKGVENTNKKFEGI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCCCCCCCCCCCCH
SIAIDEMQEVVQTLNESGKDMESKKSEIITVIDNLSAISKENAAGTEETVAAVEEQTASI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
SELANASESLAKLAEDMQVNISRFRY
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]