| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
Click here to switch to the map view.
The map label for this gene is 153932374
Identifier: 153932374
GI number: 153932374
Start: 2359803
End: 2360396
Strand: Reverse
Name: 153932374
Synonym: CLB_2219
Alternate gene names: NA
Gene position: 2360396-2359803 (Counterclockwise)
Preceding gene: 153931622
Following gene: 153932146
Centisome position: 61.1
GC content: 27.27
Gene sequence:
>594_bases ATGAAGTCTATTTTTAAAAAATTAATACCAATTATATTCATAGCAATTTTATCTATCTCTTTGACAGGATGTAGTTCAAA GCCAGATGAAACTGTTAAGGGTTTTTTTGGAGCTCTTAAGCAACAAGATATTAAAAAGGCATCTACATTTATAAACGTTA ATTCTTTTTATAAAGAATTAAAAGTTGATGAATTTGATAGCAAAGAGCAGGAGAAAATTGTAAAAGCTGTTTTATCTAAA TTTGATTATTCTTTAGGAGATGTAGAAAAGAATGGTAATACTGCTACAGCAAAGGTTTCAGTGACATCAATAGATTTAGG AAAAATAACAATAGAAACAATTGACAAAGTTTTACCAAATTTAATAGATGAAGCTTTTTCTAAAGGAAAAATTGATGAAA AGAAACAACAGGCTGTAATTATTCAACATATGCTGGATTCTATAAATGATCCTAATGCTCCAAAAATAAAAACAAATATT AATGTAAAATTAGTTAAAGGAGATAAGGGATGGCTTATAGAACCTGATGAAGAATTAGCAAATGCTCTAAGTGGTAATCT TTATTCAGTAGCAAAAAAGTTCCAATCTAAATAA
Upstream 100 bases:
>100_bases AAAATAAGTCATATAATATCTAAAAATTAATAAAAAGTTTACTTATTGTCATATTAATTGTATAATTTATACATATTAAT ATTTTGGGGGGAATTATATA
Downstream 100 bases:
>100_bases AGTAATTAAGAAGCACATACTAAGTAATAATAGTATGTGCTTCTATTGTATAGTCAAATAAAATAAATAAATTATTTATT GTTATATAACTTCAATGAAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MKSIFKKLIPIIFIAILSISLTGCSSKPDETVKGFFGALKQQDIKKASTFINVNSFYKELKVDEFDSKEQEKIVKAVLSK FDYSLGDVEKNGNTATAKVSVTSIDLGKITIETIDKVLPNLIDEAFSKGKIDEKKQQAVIIQHMLDSINDPNAPKIKTNI NVKLVKGDKGWLIEPDEELANALSGNLYSVAKKFQSK
Sequences:
>Translated_197_residues MKSIFKKLIPIIFIAILSISLTGCSSKPDETVKGFFGALKQQDIKKASTFINVNSFYKELKVDEFDSKEQEKIVKAVLSK FDYSLGDVEKNGNTATAKVSVTSIDLGKITIETIDKVLPNLIDEAFSKGKIDEKKQQAVIIQHMLDSINDPNAPKIKTNI NVKLVKGDKGWLIEPDEELANALSGNLYSVAKKFQSK >Mature_197_residues MKSIFKKLIPIIFIAILSISLTGCSSKPDETVKGFFGALKQQDIKKASTFINVNSFYKELKVDEFDSKEQEKIVKAVLSK FDYSLGDVEKNGNTATAKVSVTSIDLGKITIETIDKVLPNLIDEAFSKGKIDEKKQQAVIIQHMLDSINDPNAPKIKTNI NVKLVKGDKGWLIEPDEELANALSGNLYSVAKKFQSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21811; Mature: 21811
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIFKKLIPIIFIAILSISLTGCSSKPDETVKGFFGALKQQDIKKASTFINVNSFYKEL CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVDEFDSKEQEKIVKAVLSKFDYSLGDVEKNGNTATAKVSVTSIDLGKITIETIDKVLPN CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHH LIDEAFSKGKIDEKKQQAVIIQHMLDSINDPNAPKIKTNINVKLVKGDKGWLIEPDEELA HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCEECCHHHHH NALSGNLYSVAKKFQSK HHHCCHHHHHHHHHCCC >Mature Secondary Structure MKSIFKKLIPIIFIAILSISLTGCSSKPDETVKGFFGALKQQDIKKASTFINVNSFYKEL CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVDEFDSKEQEKIVKAVLSKFDYSLGDVEKNGNTATAKVSVTSIDLGKITIETIDKVLPN CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHH LIDEAFSKGKIDEKKQQAVIIQHMLDSINDPNAPKIKTNINVKLVKGDKGWLIEPDEELA HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCEECCHHHHH NALSGNLYSVAKKFQSK HHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA