| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153932266
Identifier: 153932266
GI number: 153932266
Start: 3034727
End: 3035017
Strand: Reverse
Name: 153932266
Synonym: CLB_2873
Alternate gene names: NA
Gene position: 3035017-3034727 (Counterclockwise)
Preceding gene: 153934268
Following gene: 153931235
Centisome position: 78.56
GC content: 31.27
Gene sequence:
>291_bases ATGGCAAATATAAATTTGAGTTTACAAGTGCTACCCGTAGTTAGTGAAGAAGAGATATATCCAGTAGTGGATAAAGTTAT AGAACTTATAGAAGTTTCTGGAGTTAAATATGAAGTAGGACCTATGGAAACTACCATGGAAGGTGAAATGGATATTCTTT TAGATATTGTTAAAAAGGCTCAGGATATATGCGTTAAGGAAGGAGCTAAGAGAGTTATTTCAGTTATAAAAATAGACTAT AAACCAGAGGGCGTTACAATGGATGAAAAAACTTATAAATATAAAAAATAG
Upstream 100 bases:
>100_bases GTGCGGAAAAATGTGTGCAGTAAGAAATATGAACAGAGTTACAGAAGGAAAAGACTTAAACATGTTAAGAGATGATGATT AATGTATAGGAGTGACTATA
Downstream 100 bases:
>100_bases ATTACAGCTATAAGAAGGAAAAATCATTATACATGGCGAACTTTATACAGGTAAGGTTGGAAGGGTAAGTTATACGTACT AAAAAAACTTACTACTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MANINLSLQVLPVVSEEEIYPVVDKVIELIEVSGVKYEVGPMETTMEGEMDILLDIVKKAQDICVKEGAKRVISVIKIDY KPEGVTMDEKTYKYKK
Sequences:
>Translated_96_residues MANINLSLQVLPVVSEEEIYPVVDKVIELIEVSGVKYEVGPMETTMEGEMDILLDIVKKAQDICVKEGAKRVISVIKIDY KPEGVTMDEKTYKYKK >Mature_95_residues ANINLSLQVLPVVSEEEIYPVVDKVIELIEVSGVKYEVGPMETTMEGEMDILLDIVKKAQDICVKEGAKRVISVIKIDYK PEGVTMDEKTYKYKK
Specific function: Unknown
COG id: COG0011
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0045 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002767 - InterPro: IPR016198 [H]
Pfam domain/function: PF01910 DUF77 [H]
EC number: NA
Molecular weight: Translated: 10850; Mature: 10719
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANINLSLQVLPVVSEEEIYPVVDKVIELIEVSGVKYEVGPMETTMEGEMDILLDIVKKA CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHH QDICVKEGAKRVISVIKIDYKPEGVTMDEKTYKYKK HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ANINLSLQVLPVVSEEEIYPVVDKVIELIEVSGVKYEVGPMETTMEGEMDILLDIVKKA CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHH QDICVKEGAKRVISVIKIDYKPEGVTMDEKTYKYKK HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8052128; 11792842 [H]