| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is gntP [C]
Identifier: 153931869
GI number: 153931869
Start: 2289401
End: 2290789
Strand: Reverse
Name: gntP [C]
Synonym: CLB_2146
Alternate gene names: 153931869
Gene position: 2290789-2289401 (Counterclockwise)
Preceding gene: 153933723
Following gene: 153931251
Centisome position: 59.29
GC content: 34.13
Gene sequence:
>1389_bases ATGGGAAACACAGTAGCAGGAAATCAAATGATATTAGGACTTGTAGTTGGAATTAGCATACTCGTATTTTTAATATTAAA AACTAAAATTCATACATTTTTAGCACTAATTATTGCAGCAGCTACTACTGGACTTGTAGGAGGAATGCCACCTAATAAAA TAATTGATTCAATATCTAAGGGTTTTGGGGGAACATTAGGAAGCATTGGTATAATCATAGGTTTTGGGGTAATGATGGGC CAGATTTTTGAAGTATCTGGTGCAGCGGAGAGAATGGCTAGAACTTTTATAAAGTTCTTAGGTAAAAAAAGAGAAGAATT AGCATTAGCAATAACAGGGTTTATAGTGTCTATACCTATATTTTGTGATTCAGGATTTATAATTTTAGCACCGCTTGCAA AAGCAATTTCCAAGAAAACTAAAAAATCAGTAGTTTCTCTAGGAGTAGCTTTAGGATTAGGACTTGTAATCACACATAGT TTGGTACCACCAACACCTGGCCCAGTAGGAGTTGCAGGGATATTTGGAGTAAGTGTAGGAAACTTTATTTTATGGGGAAT TCCTTTAGCTATACCTATGGTGATAGCCGGAATGATTTATGGAAAGTATATAGGAAAAAAAATATATCAAATTCCAGGGG ATAAAGAAGATGAGTGGATTAGAACAGAATATCAAGAGCCAGTATATGATTTTGAACATGAAGAGGATAATAGAGAATTA CCATCTACCTTTATGGCTTTTGCACCAATAATAACACCTATAATATTTATACTTATAAATACTATATTAGATGTTTTAAT TAAACAAAAATCAATAGCTCCTAGTGGATTTACTAACATGGTTCAATTTTTAGGTTCTCCAATAATTGCAGTAGGAATTG GTCTTGTAATAGCCATATATGGACTAGCAGGTAAGCTAAGCAAAGAAGATGTTATAAATGAAATGGAAAAAGGAATAAAA TCTGCTGGTATAATAATATTAGTTACTGGTGGCGGTGGAGCTTTAGGTATGGTACTTCGTGATAGTGGTACAGGGGACTA TATAGCAAAATCAATTGCAGGATCTCATATGCCAGTTGTGTTAATACCATTTATAATAGCCTCCTTAGTAAGGCTTATCC AAGGAAGTGGAACAGTTGCTATGATAACTGCGGCTTCTATAACAGCACCAATTGTTGCAGCATCAAATGTTAATCCAATA TTGGCAGCCCTTGGAGCATGTATGGGATCACTTTTATTCTCATATTTCAATGATAGTTATTTCTGGGTAGTTAACCGCTC CCTTGGAATAAAAGATGCAAAAGAACAAATAAAAGTATGGTCAGTTACTACTACTATAGCTTGGGCAGTAGGCTTAGTAG AACTAATCATATTAAGTTTTATACTATAA
Upstream 100 bases:
>100_bases ATTACATAAATTTATTACATAGATAAAGTATACATAAAATTTTTTACTAGTTTTTTTAAATACAAATGAATACCTTTACA AAACAAAAGGAGGAAGAATA
Downstream 100 bases:
>100_bases AATGTAAACCAATTCAGCTGGAGTTTTTACTTCAGCTGAATTTTACTTTAATAAAATTAGGCTATGTTTTAGAATAATGC TGATAATATATCAATTTTTA
Product: gluconate permease
Products: gluconate [Cytoplasm]; L-idonate [Cytoplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MGNTVAGNQMILGLVVGISILVFLILKTKIHTFLALIIAAATTGLVGGMPPNKIIDSISKGFGGTLGSIGIIIGFGVMMG QIFEVSGAAERMARTFIKFLGKKREELALAITGFIVSIPIFCDSGFIILAPLAKAISKKTKKSVVSLGVALGLGLVITHS LVPPTPGPVGVAGIFGVSVGNFILWGIPLAIPMVIAGMIYGKYIGKKIYQIPGDKEDEWIRTEYQEPVYDFEHEEDNREL PSTFMAFAPIITPIIFILINTILDVLIKQKSIAPSGFTNMVQFLGSPIIAVGIGLVIAIYGLAGKLSKEDVINEMEKGIK SAGIIILVTGGGGALGMVLRDSGTGDYIAKSIAGSHMPVVLIPFIIASLVRLIQGSGTVAMITAASITAPIVAASNVNPI LAALGACMGSLLFSYFNDSYFWVVNRSLGIKDAKEQIKVWSVTTTIAWAVGLVELIILSFIL
Sequences:
>Translated_462_residues MGNTVAGNQMILGLVVGISILVFLILKTKIHTFLALIIAAATTGLVGGMPPNKIIDSISKGFGGTLGSIGIIIGFGVMMG QIFEVSGAAERMARTFIKFLGKKREELALAITGFIVSIPIFCDSGFIILAPLAKAISKKTKKSVVSLGVALGLGLVITHS LVPPTPGPVGVAGIFGVSVGNFILWGIPLAIPMVIAGMIYGKYIGKKIYQIPGDKEDEWIRTEYQEPVYDFEHEEDNREL PSTFMAFAPIITPIIFILINTILDVLIKQKSIAPSGFTNMVQFLGSPIIAVGIGLVIAIYGLAGKLSKEDVINEMEKGIK SAGIIILVTGGGGALGMVLRDSGTGDYIAKSIAGSHMPVVLIPFIIASLVRLIQGSGTVAMITAASITAPIVAASNVNPI LAALGACMGSLLFSYFNDSYFWVVNRSLGIKDAKEQIKVWSVTTTIAWAVGLVELIILSFIL >Mature_461_residues GNTVAGNQMILGLVVGISILVFLILKTKIHTFLALIIAAATTGLVGGMPPNKIIDSISKGFGGTLGSIGIIIGFGVMMGQ IFEVSGAAERMARTFIKFLGKKREELALAITGFIVSIPIFCDSGFIILAPLAKAISKKTKKSVVSLGVALGLGLVITHSL VPPTPGPVGVAGIFGVSVGNFILWGIPLAIPMVIAGMIYGKYIGKKIYQIPGDKEDEWIRTEYQEPVYDFEHEEDNRELP STFMAFAPIITPIIFILINTILDVLIKQKSIAPSGFTNMVQFLGSPIIAVGIGLVIAIYGLAGKLSKEDVINEMEKGIKS AGIIILVTGGGGALGMVLRDSGTGDYIAKSIAGSHMPVVLIPFIIASLVRLIQGSGTVAMITAASITAPIVAASNVNPIL AALGACMGSLLFSYFNDSYFWVVNRSLGIKDAKEQIKVWSVTTTIAWAVGLVELIILSFIL
Specific function: Transport Of Gluconate And L-Idonate. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gntP permease family [H]
Homologues:
Organism=Escherichia coli, GI48994935, Length=450, Percent_Identity=33.3333333333333, Blast_Score=229, Evalue=2e-61, Organism=Escherichia coli, GI1790716, Length=450, Percent_Identity=31.3333333333333, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI1789097, Length=434, Percent_Identity=34.1013824884793, Blast_Score=212, Evalue=4e-56, Organism=Escherichia coli, GI1788707, Length=458, Percent_Identity=31.2227074235808, Blast_Score=208, Evalue=5e-55, Organism=Escherichia coli, GI48994939, Length=449, Percent_Identity=31.6258351893096, Blast_Score=207, Evalue=8e-55, Organism=Escherichia coli, GI2367370, Length=453, Percent_Identity=32.8918322295806, Blast_Score=202, Evalue=3e-53, Organism=Escherichia coli, GI1790776, Length=460, Percent_Identity=30.8695652173913, Blast_Score=197, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 48722; Mature: 48591
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNTVAGNQMILGLVVGISILVFLILKTKIHTFLALIIAAATTGLVGGMPPNKIIDSISK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GFGGTLGSIGIIIGFGVMMGQIFEVSGAAERMARTFIKFLGKKREELALAITGFIVSIPI HCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FCDSGFIILAPLAKAISKKTKKSVVSLGVALGLGLVITHSLVPPTPGPVGVAGIFGVSVG EECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH NFILWGIPLAIPMVIAGMIYGKYIGKKIYQIPGDKEDEWIRTEYQEPVYDFEHEEDNREL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC PSTFMAFAPIITPIIFILINTILDVLIKQKSIAPSGFTNMVQFLGSPIIAVGIGLVIAIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH GLAGKLSKEDVINEMEKGIKSAGIIILVTGGGGALGMVLRDSGTGDYIAKSIAGSHMPVV HHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCHH LIPFIIASLVRLIQGSGTVAMITAASITAPIVAASNVNPILAALGACMGSLLFSYFNDSY HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCE FWVVNRSLGIKDAKEQIKVWSVTTTIAWAVGLVELIILSFIL EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GNTVAGNQMILGLVVGISILVFLILKTKIHTFLALIIAAATTGLVGGMPPNKIIDSISK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GFGGTLGSIGIIIGFGVMMGQIFEVSGAAERMARTFIKFLGKKREELALAITGFIVSIPI HCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FCDSGFIILAPLAKAISKKTKKSVVSLGVALGLGLVITHSLVPPTPGPVGVAGIFGVSVG EECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH NFILWGIPLAIPMVIAGMIYGKYIGKKIYQIPGDKEDEWIRTEYQEPVYDFEHEEDNREL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC PSTFMAFAPIITPIIFILINTILDVLIKQKSIAPSGFTNMVQFLGSPIIAVGIGLVIAIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH GLAGKLSKEDVINEMEKGIKSAGIIILVTGGGGALGMVLRDSGTGDYIAKSIAGSHMPVV HHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCHH LIPFIIASLVRLIQGSGTVAMITAASITAPIVAASNVNPILAALGACMGSLLFSYFNDSY HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCE FWVVNRSLGIKDAKEQIKVWSVTTTIAWAVGLVELIILSFIL EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: gluconate [Periplasm]; Proton [Periplasm]; L-idonate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] Proton [Periplasm] + L-idonate [Periplasm] = L-idonate [Cytoplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]