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The map label for this gene is 153931746

Identifier: 153931746

GI number: 153931746

Start: 3122268

End: 3123413

Strand: Reverse

Name: 153931746

Synonym: CLB_2970

Alternate gene names: NA

Gene position: 3123413-3122268 (Counterclockwise)

Preceding gene: 153931022

Following gene: 153932708

Centisome position: 80.85

GC content: 33.25

Gene sequence:

>1146_bases
ATGGCAATGATTAATCCAGATTTACAAAATAAAATACAGGCAGAAACACAAGAAAAAATTAAAAATGCATTAGAAACTGG
TAAGACAGAGGATTTATCTAATGCAATAGTAGCTATGGCTACAGATATTGAAACCAACATAATGAAGCAAGCGAAAGCTA
CTATAAATGAAGATTTGAATGATAAGACTGTATTAAATAAAAGAGGTTTAAATCCTTTAACTGCAGAAGAAACAAAATAC
TACAATGAAGTAATATCAAAAGGCGGATTTAATGGTATAGAAGAACTAATGCCTAAAACTGTAATAGATAGAGTATTTGA
GGATTTAGAAAAGGAACATCCTTTGTTATCTAAGATAGACTTTGTTAATACCACAGGAATAACGGAATGGATAACTAGAA
CTAAAGAGGTTGAAGGGGCATGGTGGGGACCACTTGCGGATGAAATTAAAAGGAAATTAGATAATGGCTTTAAGAAAGAA
AAGACAAACTTATTTAAACTAAGTGCTTATATCCCGGTTACTAAATCTATGCTTGATTTGGGACCACAATGGCTAGATAA
ATTTGTAAGAGCAATGCTTACTGAATCTATGGCTATTGCTTTAGAATTAGCTATTGTAGCAGGAACAGGAAAAGAACAAC
CCATAGGAATGCTAAAAGATTTATCTGCAGCAGTAACAGATGGAGTATATTCAGATAAAGTAGCTACTAAATTAACAGAC
TTTTCTCCAGCGACTTTAGGTAAAAACATCATGGCTCCACTTACTAAAGAAGGAACTAGAAATGTAACGGGAGTTATAAT
GGTAGTTAATCCGATGGATTATTGGGAAAAAATCTTTGGACAAACTACTTTTTTAACTGCATCAGGAACTTATGTATATG
GATTATTACCAATCCCAGGAGATATAGTACAATCTGTTGCGGTTCCAAAGGGTAAAATGATAGTTGGTATGGCTAAAGAT
TATTTTATGGGGATAGGATCTAGTCAAAAAATTGAGTATTCTGACCAGTATCATTTTCTAGAAGATGAAAGGGTATACCT
TGCTAAGCAATATGGCAATGGTAAGCCAAAAGATAATGATAGCTTCCTAGTTTTTGATATAAGCAATTTAGAAACAGAAC
CACCAAAAGCTACTAAGGCTAAGTAG

Upstream 100 bases:

>100_bases
TTAAAGAACCACAGGAACTTAAACAGGAGCCACAAGTGGTTGAAAATAAAAATAAACAAGCTATACAAAATTTATTTAAA
AATTTAGGAGGTATTAACTA

Downstream 100 bases:

>100_bases
GTGTGATAAATGCTTGAAGAGTTAAAAAGATATCTTAGAGAAGAAGACAATGAGGATATTTTAAGCGATATATTAAAAGA
TGGAGAAAAATATTTAAATA

Product: major capsid protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MAMINPDLQNKIQAETQEKIKNALETGKTEDLSNAIVAMATDIETNIMKQAKATINEDLNDKTVLNKRGLNPLTAEETKY
YNEVISKGGFNGIEELMPKTVIDRVFEDLEKEHPLLSKIDFVNTTGITEWITRTKEVEGAWWGPLADEIKRKLDNGFKKE
KTNLFKLSAYIPVTKSMLDLGPQWLDKFVRAMLTESMAIALELAIVAGTGKEQPIGMLKDLSAAVTDGVYSDKVATKLTD
FSPATLGKNIMAPLTKEGTRNVTGVIMVVNPMDYWEKIFGQTTFLTASGTYVYGLLPIPGDIVQSVAVPKGKMIVGMAKD
YFMGIGSSQKIEYSDQYHFLEDERVYLAKQYGNGKPKDNDSFLVFDISNLETEPPKATKAK

Sequences:

>Translated_381_residues
MAMINPDLQNKIQAETQEKIKNALETGKTEDLSNAIVAMATDIETNIMKQAKATINEDLNDKTVLNKRGLNPLTAEETKY
YNEVISKGGFNGIEELMPKTVIDRVFEDLEKEHPLLSKIDFVNTTGITEWITRTKEVEGAWWGPLADEIKRKLDNGFKKE
KTNLFKLSAYIPVTKSMLDLGPQWLDKFVRAMLTESMAIALELAIVAGTGKEQPIGMLKDLSAAVTDGVYSDKVATKLTD
FSPATLGKNIMAPLTKEGTRNVTGVIMVVNPMDYWEKIFGQTTFLTASGTYVYGLLPIPGDIVQSVAVPKGKMIVGMAKD
YFMGIGSSQKIEYSDQYHFLEDERVYLAKQYGNGKPKDNDSFLVFDISNLETEPPKATKAK
>Mature_380_residues
AMINPDLQNKIQAETQEKIKNALETGKTEDLSNAIVAMATDIETNIMKQAKATINEDLNDKTVLNKRGLNPLTAEETKYY
NEVISKGGFNGIEELMPKTVIDRVFEDLEKEHPLLSKIDFVNTTGITEWITRTKEVEGAWWGPLADEIKRKLDNGFKKEK
TNLFKLSAYIPVTKSMLDLGPQWLDKFVRAMLTESMAIALELAIVAGTGKEQPIGMLKDLSAAVTDGVYSDKVATKLTDF
SPATLGKNIMAPLTKEGTRNVTGVIMVVNPMDYWEKIFGQTTFLTASGTYVYGLLPIPGDIVQSVAVPKGKMIVGMAKDY
FMGIGSSQKIEYSDQYHFLEDERVYLAKQYGNGKPKDNDSFLVFDISNLETEPPKATKAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42332; Mature: 42201

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMINPDLQNKIQAETQEKIKNALETGKTEDLSNAIVAMATDIETNIMKQAKATINEDLN
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEHHHHHHHHHHHHHHHCCCCC
DKTVLNKRGLNPLTAEETKYYNEVISKGGFNGIEELMPKTVIDRVFEDLEKEHPLLSKID
CHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHC
FVNTTGITEWITRTKEVEGAWWGPLADEIKRKLDNGFKKEKTNLFKLSAYIPVTKSMLDL
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHCCCEEEEEEECCHHHHHHHC
GPQWLDKFVRAMLTESMAIALELAIVAGTGKEQPIGMLKDLSAAVTDGVYSDKVATKLTD
CHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCC
FSPATLGKNIMAPLTKEGTRNVTGVIMVVNPMDYWEKIFGQTTFLTASGTYVYGLLPIPG
CCCHHHCCHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHCCEEEEEECCCEEEEEECCCH
DIVQSVAVPKGKMIVGMAKDYFMGIGSSQKIEYSDQYHFLEDERVYLAKQYGNGKPKDND
HHHHHHCCCCCCEEEEEHHHHHHCCCCCCCEEECCCEEEECCCEEEEEEECCCCCCCCCC
SFLVFDISNLETEPPKATKAK
CEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
AMINPDLQNKIQAETQEKIKNALETGKTEDLSNAIVAMATDIETNIMKQAKATINEDLN
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEHHHHHHHHHHHHHHHCCCCC
DKTVLNKRGLNPLTAEETKYYNEVISKGGFNGIEELMPKTVIDRVFEDLEKEHPLLSKID
CHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHC
FVNTTGITEWITRTKEVEGAWWGPLADEIKRKLDNGFKKEKTNLFKLSAYIPVTKSMLDL
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHCCCEEEEEEECCHHHHHHHC
GPQWLDKFVRAMLTESMAIALELAIVAGTGKEQPIGMLKDLSAAVTDGVYSDKVATKLTD
CHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCC
FSPATLGKNIMAPLTKEGTRNVTGVIMVVNPMDYWEKIFGQTTFLTASGTYVYGLLPIPG
CCCHHHCCHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHCCEEEEEECCCEEEEEECCCH
DIVQSVAVPKGKMIVGMAKDYFMGIGSSQKIEYSDQYHFLEDERVYLAKQYGNGKPKDND
HHHHHHCCCCCCEEEEEHHHHHHCCCCCCCEEECCCEEEECCCEEEEEEECCCCCCCCCC
SFLVFDISNLETEPPKATKAK
CEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA