| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153931570
Identifier: 153931570
GI number: 153931570
Start: 3323177
End: 3323449
Strand: Reverse
Name: 153931570
Synonym: CLB_3180
Alternate gene names: NA
Gene position: 3323449-3323177 (Counterclockwise)
Preceding gene: 153931855
Following gene: 153934127
Centisome position: 86.02
GC content: 32.6
Gene sequence:
>273_bases ATGACAAGGACTCCTTTAAAAAAAGTAATAAAATCCAAAATTAAAGCTAACAAGGAGCTTACTAAAGAAGAAAAATTAAG AGAGAGAATGAAGTACGAAATAGCAATAGAGCTCGGCCTACAAGATAAAGTAGACGAATTAGGGTGGGGAGGACTAACCT CAGAAGAAACCGGAAGAATAGGGGGTATAATGACCAAAAGAAAAAAAGAGCTTAAACTTCCTAAAAATGAAGAAATATTA ATGATGAGTGAAATTAAAAATAGTATGCAATAG
Upstream 100 bases:
>100_bases AAAGAAGAGGCTGGTATTTCAGTCTCTTTTTATAATAGTATAAAATACCCCTACAAGGCAAATAATAGTAATAATAGATT ATTTGTATGGAGGGATTTAA
Downstream 100 bases:
>100_bases AAGCACTAATCTATTGACTTACCTAATAAAAGTATATAATATTTATTAGGTAAGTATATTTTTATAAATTAAGGAGAGTT TAGGAATGGAATGTTATAGA
Product: small acid-soluble spore protein
Products: NA
Alternate protein names: Small Acid-Soluble Spore Protein Alpha/Beta Type; Small Acid-Soluble Spore Protein Alpha/Beta Family; Small Acid-Soluble Spore Protein Beta; Small Acid-Soluble Spore Protein Alpha/Beta Family Protein
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MTRTPLKKVIKSKIKANKELTKEEKLRERMKYEIAIELGLQDKVDELGWGGLTSEETGRIGGIMTKRKKELKLPKNEEIL MMSEIKNSMQ
Sequences:
>Translated_90_residues MTRTPLKKVIKSKIKANKELTKEEKLRERMKYEIAIELGLQDKVDELGWGGLTSEETGRIGGIMTKRKKELKLPKNEEIL MMSEIKNSMQ >Mature_89_residues TRTPLKKVIKSKIKANKELTKEEKLRERMKYEIAIELGLQDKVDELGWGGLTSEETGRIGGIMTKRKKELKLPKNEEILM MSEIKNSMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10420; Mature: 10288
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: PS00304 SASP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTPLKKVIKSKIKANKELTKEEKLRERMKYEIAIELGLQDKVDELGWGGLTSEETGRI CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCCCCCCCCCC GGIMTKRKKELKLPKNEEILMMSEIKNSMQ CCHHHHHHHHCCCCCCCCEEEHHHHHHHCC >Mature Secondary Structure TRTPLKKVIKSKIKANKELTKEEKLRERMKYEIAIELGLQDKVDELGWGGLTSEETGRI CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCCCCCCCCCC GGIMTKRKKELKLPKNEEILMMSEIKNSMQ CCHHHHHHHHCCCCCCCCEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA