| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is ygfJ [H]
Identifier: 153931203
GI number: 153931203
Start: 2939503
End: 2940072
Strand: Reverse
Name: ygfJ [H]
Synonym: CLB_2792
Alternate gene names: 153931203
Gene position: 2940072-2939503 (Counterclockwise)
Preceding gene: 153931709
Following gene: 153931142
Centisome position: 76.1
GC content: 27.72
Gene sequence:
>570_bases ATGAGCGTTGATGGTATAGTACTAGCAGCAGGGTTGTCTTCACGGGTAGGAAGATATAAATTAGCATTGGATATACAAGG AAAAACAGTTATAGAAAGATGTATAGAATCCATGTATGATATTTGTTCTAATGTAATAGTTGTTGGCGGACATAATTATA ATTTACTTCAAGATATATTAAAGCCATACGCTAAAGTAAAGATGATTTTAAATGAAAATTATCTTGAGGGTATGTTTAGC TCTGTAAAAAAAGGATTATATCAAGTAAAAGGAGATAAATTTTTTTTAACTCCAGCAGATTATCCACTAATAAAAAAAGA TACCTACATAAAAATGCTTTCTACTAATAGTGATATAGTTATACCAACCTATAAAAACATAAAAGGGCATCCAGTACTTA TAAAAAGAAATATTATCAATAATATTTTATCAGAAGAATACGTTAGCTTGAGAGAGTTTATAAATAAGCATGGTTTTTCT ACTTTATGTATAGAAGATCAAGGAATACTATTAGATATAGATACCGACCAAGATTATATTGATATACTGAATAGAGCTAA GTTTTATTAA
Upstream 100 bases:
>100_bases GTGCCATAAGCTTCTAACATATGTAGTTAGTCCAAAGGACAATATCTTCAGATATTAGTTGATAAAATAGATATAAGCAA ATTCAGAAGGAAGTGATATT
Downstream 100 bases:
>100_bases TAATCATTATAACTGCTATTCTTCCTGATTCATAGTGATGTTTAGTGTAGTGATATCTCTCTAAAAACATGTTCAACATC ATCAAGGTCTTAAAGACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSVDGIVLAAGLSSRVGRYKLALDIQGKTVIERCIESMYDICSNVIVVGGHNYNLLQDILKPYAKVKMILNENYLEGMFS SVKKGLYQVKGDKFFLTPADYPLIKKDTYIKMLSTNSDIVIPTYKNIKGHPVLIKRNIINNILSEEYVSLREFINKHGFS TLCIEDQGILLDIDTDQDYIDILNRAKFY
Sequences:
>Translated_189_residues MSVDGIVLAAGLSSRVGRYKLALDIQGKTVIERCIESMYDICSNVIVVGGHNYNLLQDILKPYAKVKMILNENYLEGMFS SVKKGLYQVKGDKFFLTPADYPLIKKDTYIKMLSTNSDIVIPTYKNIKGHPVLIKRNIINNILSEEYVSLREFINKHGFS TLCIEDQGILLDIDTDQDYIDILNRAKFY >Mature_188_residues SVDGIVLAAGLSSRVGRYKLALDIQGKTVIERCIESMYDICSNVIVVGGHNYNLLQDILKPYAKVKMILNENYLEGMFSS VKKGLYQVKGDKFFLTPADYPLIKKDTYIKMLSTNSDIVIPTYKNIKGHPVLIKRNIINNILSEEYVSLREFINKHGFST LCIEDQGILLDIDTDQDYIDILNRAKFY
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789242, Length=186, Percent_Identity=30.6451612903226, Blast_Score=105, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017696 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21510; Mature: 21379
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDGIVLAAGLSSRVGRYKLALDIQGKTVIERCIESMYDICSNVIVVGGHNYNLLQDIL CCCCCEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHH KPYAKVKMILNENYLEGMFSSVKKGLYQVKGDKFFLTPADYPLIKKDTYIKMLSTNSDIV HHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCEEEECCCCCCEECCCCEEEEEECCCCEE IPTYKNIKGHPVLIKRNIINNILSEEYVSLREFINKHGFSTLCIEDQGILLDIDTDQDYI EECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCHHH DILNRAKFY HHHHHHCCC >Mature Secondary Structure SVDGIVLAAGLSSRVGRYKLALDIQGKTVIERCIESMYDICSNVIVVGGHNYNLLQDIL CCCCEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHH KPYAKVKMILNENYLEGMFSSVKKGLYQVKGDKFFLTPADYPLIKKDTYIKMLSTNSDIV HHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCEEEECCCCCCEECCCCEEEEEECCCCEE IPTYKNIKGHPVLIKRNIINNILSEEYVSLREFINKHGFSTLCIEDQGILLDIDTDQDYI EECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCHHH DILNRAKFY HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]