| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is insK [H]
Identifier: 153931142
GI number: 153931142
Start: 2934899
End: 2935516
Strand: Reverse
Name: insK [H]
Synonym: CLB_2787
Alternate gene names: 153931142
Gene position: 2935516-2934899 (Counterclockwise)
Preceding gene: 153931203
Following gene: 153933447
Centisome position: 75.98
GC content: 33.82
Gene sequence:
>618_bases TTGCCATTTTCATGTCCTTTGTCAATTCTGAATTTAAAATCTGTTTGTCGTAAGAAGAAAAAGAATTACAAGAAAACAAC ACCACAAGTAACAGCAGAAAATACTTTAAATAGGAATTTTAATTCTGATAAATTCGGGGAGAAATGGCTTACAGATGTAA CTGAGATGAAGTACGGAATTGGAGGCAAGGCTTATCTAAGTGCCATATTAGACCTTGCTGACAAAAGCATTGTATCATTT GTAATTGGTCATTCTAATAATACTCTTGTTTTTAAAACATTTGATATAGCTCATGAGCAGCATCCTGACGCAAAGCCTCT GTTTCACAGTGACCGAGGCTTTCAATATACCTCTAAAAATTTTAAGAAAAAGTTAGATGATGCAGATATGACTCAAAGCA TGTCCAGGGTATCACGTTGCATCGACAACGGTCCGATGGAAGCATTCTGGGGCATGTTAAAATCTGAAATGTATTACTTG AGAAAGTTCAATTCATATAGTGAACTAGAAAGTGTAATCACTGATTATATAAATTATTACAACAATCAAAGATATCAGAA GCGTCTAAAATGTATGACACCTTTAGAATATCGAGAGTATCTGAAATCTATAGCATAA
Upstream 100 bases:
>100_bases CAACCACCGTTTTGCATTCTTTCATAGTTCCAAGAACCTTGAAGGAAAAATGAACGCAACCAAACAGAAATATGATCTTT TTTGGTTAATTTTAATTCTT
Downstream 100 bases:
>100_bases AATACCGCCAACTACAAAAGTAATTGCCGGTATCAAATATTTTTATTTTTTTCACTGTCTACTTGACAGGGAGCAGTTCA TTTATCAACAGCCTGAAGGT
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MPFSCPLSILNLKSVCRKKKKNYKKTTPQVTAENTLNRNFNSDKFGEKWLTDVTEMKYGIGGKAYLSAILDLADKSIVSF VIGHSNNTLVFKTFDIAHEQHPDAKPLFHSDRGFQYTSKNFKKKLDDADMTQSMSRVSRCIDNGPMEAFWGMLKSEMYYL RKFNSYSELESVITDYINYYNNQRYQKRLKCMTPLEYREYLKSIA
Sequences:
>Translated_205_residues MPFSCPLSILNLKSVCRKKKKNYKKTTPQVTAENTLNRNFNSDKFGEKWLTDVTEMKYGIGGKAYLSAILDLADKSIVSF VIGHSNNTLVFKTFDIAHEQHPDAKPLFHSDRGFQYTSKNFKKKLDDADMTQSMSRVSRCIDNGPMEAFWGMLKSEMYYL RKFNSYSELESVITDYINYYNNQRYQKRLKCMTPLEYREYLKSIA >Mature_204_residues PFSCPLSILNLKSVCRKKKKNYKKTTPQVTAENTLNRNFNSDKFGEKWLTDVTEMKYGIGGKAYLSAILDLADKSIVSFV IGHSNNTLVFKTFDIAHEQHPDAKPLFHSDRGFQYTSKNFKKKLDDADMTQSMSRVSRCIDNGPMEAFWGMLKSEMYYLR KFNSYSELESVITDYINYYNNQRYQKRLKCMTPLEYREYLKSIA
Specific function: Involved in the transposition of the insertion sequence IS150 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI1789981, Length=195, Percent_Identity=38.4615384615385, Blast_Score=139, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 23939; Mature: 23807
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFSCPLSILNLKSVCRKKKKNYKKTTPQVTAENTLNRNFNSDKFGEKWLTDVTEMKYGI CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC GGKAYLSAILDLADKSIVSFVIGHSNNTLVFKTFDIAHEQHPDAKPLFHSDRGFQYTSKN CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHH FKKKLDDADMTQSMSRVSRCIDNGPMEAFWGMLKSEMYYLRKFNSYSELESVITDYINYY HHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NNQRYQKRLKCMTPLEYREYLKSIA CCHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure PFSCPLSILNLKSVCRKKKKNYKKTTPQVTAENTLNRNFNSDKFGEKWLTDVTEMKYGI CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC GGKAYLSAILDLADKSIVSFVIGHSNNTLVFKTFDIAHEQHPDAKPLFHSDRGFQYTSKN CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHH FKKKLDDADMTQSMSRVSRCIDNGPMEAFWGMLKSEMYYLRKFNSYSELESVITDYINYY HHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NNQRYQKRLKCMTPLEYREYLKSIA CCHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2841644; 2541046; 8041620; 9278503 [H]