| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153931132
Identifier: 153931132
GI number: 153931132
Start: 1981144
End: 1981995
Strand: Reverse
Name: 153931132
Synonym: CLB_1866
Alternate gene names: NA
Gene position: 1981995-1981144 (Counterclockwise)
Preceding gene: 153931750
Following gene: 153933416
Centisome position: 51.3
GC content: 25.59
Gene sequence:
>852_bases ATGGAGATCTTTAAAAGTGAGTTTGAAAGGTTATGGAAGAACAAATTAACTTTATTTTGTTTTATGCTGATACCTCTTGC TATAATAGGTTCTTCAAAATATTACCTTGGAAATAATTTGAAATTGCCTGTAAATAGTGCTGAATATACTTCCTTTGGTA ACTATTCCTTTATGATGTTCCAGGAAATGTTAGCTACTTTATTTAATTTTATTGCTATTTTACTTGTATGTATATCTATT ACGGAGGAATATAGAAAGGGCTTAATTAGAATGATTATGATAAGAGGTTATTCTTTTAAAGAAATATATTTTGCAAAAAT AGCCTCTATCATAGCTACAATGTTTATATTTTTTGTAGTGTATTTTATATTATCTACAGCAATTGGATATTTTATAGCAC CTAAATTATATAGAGTAAAGCTTTTTTATCATAATAGTACCGTAAGTAACTTAAATGCTATTCTTTATTCTTTAAAATAT TATGCCTTAGGATTTTTAACTGTTTTAGCAATACTTTCTGTATTTGCTTTTTTTTCAGTAATTTTTAAAAGTTCCACAGG AACTATAGCTGCATGTATATGTTTTTTAATAGGGAGTTATATTTTTTCACAAGTTATTATGCATTGTGGTATTATGTTAA GTAAAAATTTACATAATGGTACCAATCTTATTAAAATGGTGGAAAAATTATATTTGATTACTATTCCGGAAATTCAACAT ACTGGTATATGTATGGTTTTAGCTGAACATCCGGTATTAAATTATTGGATTTTAGGTGTATTAGCAGGCTATATAATTAT ATTTACATCTATTACTTGTGCTATATTTTCTAAAAGGGACAATTTTATTTAA
Upstream 100 bases:
>100_bases TAAAATTCAAAGGATCTTTAGAAGAACTACTTTCTATGGGGGATGGCAATATTGAAGAGGTGTTTTTGCAAGTATTAAAA ACTAAGGAGGTAGCCTTATA
Downstream 100 bases:
>100_bases TTTTCTAAGATATATATAGGGTATTTAACAGCAAGACTACAGCTTAAATTAAGAATTATTCTATATCTAAAAAGATTCTT ATTATACAATGGAAAGGAAG
Product: ABC transporter, permease protein
Products: NA
Alternate protein names: Abc Transporter Permease Protein
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MEIFKSEFERLWKNKLTLFCFMLIPLAIIGSSKYYLGNNLKLPVNSAEYTSFGNYSFMMFQEMLATLFNFIAILLVCISI TEEYRKGLIRMIMIRGYSFKEIYFAKIASIIATMFIFFVVYFILSTAIGYFIAPKLYRVKLFYHNSTVSNLNAILYSLKY YALGFLTVLAILSVFAFFSVIFKSSTGTIAACICFLIGSYIFSQVIMHCGIMLSKNLHNGTNLIKMVEKLYLITIPEIQH TGICMVLAEHPVLNYWILGVLAGYIIIFTSITCAIFSKRDNFI
Sequences:
>Translated_283_residues MEIFKSEFERLWKNKLTLFCFMLIPLAIIGSSKYYLGNNLKLPVNSAEYTSFGNYSFMMFQEMLATLFNFIAILLVCISI TEEYRKGLIRMIMIRGYSFKEIYFAKIASIIATMFIFFVVYFILSTAIGYFIAPKLYRVKLFYHNSTVSNLNAILYSLKY YALGFLTVLAILSVFAFFSVIFKSSTGTIAACICFLIGSYIFSQVIMHCGIMLSKNLHNGTNLIKMVEKLYLITIPEIQH TGICMVLAEHPVLNYWILGVLAGYIIIFTSITCAIFSKRDNFI >Mature_283_residues MEIFKSEFERLWKNKLTLFCFMLIPLAIIGSSKYYLGNNLKLPVNSAEYTSFGNYSFMMFQEMLATLFNFIAILLVCISI TEEYRKGLIRMIMIRGYSFKEIYFAKIASIIATMFIFFVVYFILSTAIGYFIAPKLYRVKLFYHNSTVSNLNAILYSLKY YALGFLTVLAILSVFAFFSVIFKSSTGTIAACICFLIGSYIFSQVIMHCGIMLSKNLHNGTNLIKMVEKLYLITIPEIQH TGICMVLAEHPVLNYWILGVLAGYIIIFTSITCAIFSKRDNFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32433; Mature: 32433
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIFKSEFERLWKNKLTLFCFMLIPLAIIGSSKYYLGNNLKLPVNSAEYTSFGNYSFMMF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCCCHHHHHH QEMLATLFNFIAILLVCISITEEYRKGLIRMIMIRGYSFKEIYFAKIASIIATMFIFFVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH YFILSTAIGYFIAPKLYRVKLFYHNSTVSNLNAILYSLKYYALGFLTVLAILSVFAFFSV HHHHHHHHHHHHCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFKSSTGTIAACICFLIGSYIFSQVIMHCGIMLSKNLHNGTNLIKMVEKLYLITIPEIQH HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC TGICMVLAEHPVLNYWILGVLAGYIIIFTSITCAIFSKRDNFI CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MEIFKSEFERLWKNKLTLFCFMLIPLAIIGSSKYYLGNNLKLPVNSAEYTSFGNYSFMMF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCCCHHHHHH QEMLATLFNFIAILLVCISITEEYRKGLIRMIMIRGYSFKEIYFAKIASIIATMFIFFVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH YFILSTAIGYFIAPKLYRVKLFYHNSTVSNLNAILYSLKYYALGFLTVLAILSVFAFFSV HHHHHHHHHHHHCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFKSSTGTIAACICFLIGSYIFSQVIMHCGIMLSKNLHNGTNLIKMVEKLYLITIPEIQH HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC TGICMVLAEHPVLNYWILGVLAGYIIIFTSITCAIFSKRDNFI CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA