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The map label for this gene is yjdF [H]

Identifier: 153930992

GI number: 153930992

Start: 2061505

End: 2061879

Strand: Reverse

Name: yjdF [H]

Synonym: CLB_1935

Alternate gene names: 153930992

Gene position: 2061879-2061505 (Counterclockwise)

Preceding gene: 153932950

Following gene: 153932725

Centisome position: 53.37

GC content: 27.2

Gene sequence:

>375_bases
ATGATTAAATTAATAGTTTTATTTGACGAACCTTTTTGGATGGGTATTTTTGAAAAACAGGATCAAGATAAAATTCAAAT
ATGTAGAGTGGTTTTTGGTCAGGAACCTAAAGACTATGAAGTATATGATTTTATCCTAAAAAATTATTACAATCTTAAGT
TTAGTGACCCAATAGCAATAGTAAAAAAGCCTAAGAAAGAAATTAATCCCAAAAGGATGCAAAGAAAAATTAAGAAAACA
GTACAGGAAAATGGTATTGGAACAAAGGCACAACAGGCTTTAAAACTTGATTATGAAGATAAAAAAACAGAGAGAAAGAT
TAGATCAAAGGAAGATCATGAAAAATTAAAAAAACTTAAATTTGAGAAAAGATAG

Upstream 100 bases:

>100_bases
CGATTCGGTTGGTAGTCCGAATGGGGTAATTAGCCCTCAGTAACCTGCCCTCCTGGGGTTGTCCATTCTCTAAATTTAGC
TGTGCAACAGGAGGAGAAAA

Downstream 100 bases:

>100_bases
GAAAAGAAAGCTAAAAAGAAAAAGGGTCATTAATATATAAATACAAAGAAAATTTTAAATGAATTTCCCTATTGGGTAAA
ATAACATCTAGCAATTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MIKLIVLFDEPFWMGIFEKQDQDKIQICRVVFGQEPKDYEVYDFILKNYYNLKFSDPIAIVKKPKKEINPKRMQRKIKKT
VQENGIGTKAQQALKLDYEDKKTERKIRSKEDHEKLKKLKFEKR

Sequences:

>Translated_124_residues
MIKLIVLFDEPFWMGIFEKQDQDKIQICRVVFGQEPKDYEVYDFILKNYYNLKFSDPIAIVKKPKKEINPKRMQRKIKKT
VQENGIGTKAQQALKLDYEDKKTERKIRSKEDHEKLKKLKFEKR
>Mature_124_residues
MIKLIVLFDEPFWMGIFEKQDQDKIQICRVVFGQEPKDYEVYDFILKNYYNLKFSDPIAIVKKPKKEINPKRMQRKIKKT
VQENGIGTKAQQALKLDYEDKKTERKIRSKEDHEKLKKLKFEKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016787 [H]

Pfam domain/function: PF11208 DUF2992 [H]

EC number: NA

Molecular weight: Translated: 15026; Mature: 15026

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLIVLFDEPFWMGIFEKQDQDKIQICRVVFGQEPKDYEVYDFILKNYYNLKFSDPIAI
CEEEEEEECCCCEEHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHE
VKKPKKEINPKRMQRKIKKTVQENGIGTKAQQALKLDYEDKKTERKIRSKEDHEKLKKLK
EECCHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHC
FEKR
CCCC
>Mature Secondary Structure
MIKLIVLFDEPFWMGIFEKQDQDKIQICRVVFGQEPKDYEVYDFILKNYYNLKFSDPIAI
CEEEEEEECCCCEEHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHE
VKKPKKEINPKRMQRKIKKTVQENGIGTKAQQALKLDYEDKKTERKIRSKEDHEKLKKLK
EECCHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHC
FEKR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]