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The map label for this gene is yndE [H]

Identifier: 153930836

GI number: 153930836

Start: 2874279

End: 2875412

Strand: Reverse

Name: yndE [H]

Synonym: CLB_2739

Alternate gene names: 153930836

Gene position: 2875412-2874279 (Counterclockwise)

Preceding gene: 153932661

Following gene: 153933858

Centisome position: 74.43

GC content: 24.69

Gene sequence:

>1134_bases
ATGGAAAATAGCAGAAATAATGTTTTAACTACAAGTCAAACTATAGTTATTATAGTAGGATCTATGCTAGGAATAGGGAT
ATTATCTCTTCCAGCTAATTTAAGTAAGATAGCTCACAATGACGGTTGGATTGGGGTGGTTATAGGAAGTTTATATCCAC
TTTACATGGGGCTTTGTGCTATATTAATATTCAAAGATAATTCCTACCAAAATACTAACATAATAGAAATAAGTAAAAAT
TATTTTGGGAAAATTTTAGGTAGCTCATTGTCTTTTATATTTACATTCCAATTTTTTGCTTATATAATTATTACTGCTGC
TAATATGAGTAATATGTTAAGAGTTTATTTAGTTTTATTTTTAGAGCAGTATAAATTGGCCATTCCAATACTATTAATTT
CAGTATATACCGCCTCTAAAGGTATAAGAGCTTTAGGAAGAATAAATGAAATTATTTTTTATGCATCTATACCGTTAATA
TTATTAACTGTTCTGGGAATAAAACAGGGAAATATCCTCAATATTCAACCTATATTAGGAAACCCATTCTCCTCTATTTT
AAAAGCTAGTATAGAGCCTGTATATTCCTTTGTAGGTATAGAAATTATTTTTTTAATAGTTCCTTTAATGCAGGATAAAA
GTAAGATAAAGAGTTCATTTTTAAAGAGTATATCAATTATAGTTTTTTTGTATATATGGTTAAGTTTTGTTTCTATATAT
TATTTAGGAGCAGATGTAGCAAAAAATTTATATTGGCCTACTTTATCTCTTGCAGAAACAATTGCTATACCAGGTATAAG
TAATTTTAAATTTGTGTTTATGTTTTTATGGAGTAATATAATTTTTAAAACTATAGCTAATCAGAACTATTTTTTTTATT
ATTCATTGTCTAGTATATTTAAAAAAATAAATTCCAGTATTTTGTATATGATAGTATTTTTCTTTGCTACTATAATTGTT
ACTAGATTATATAGCTTTATACTTCTTCAAAAAATTAATAAAGGTATTAGTATATTTTATTTAATATTTAATTTGATTTT
TATAACTACCATAACTGCTATAAAAATTATAAAGAATGGAGGGAAAAATGAAAAAACCAATGCAAAAGATAATGAAAATT
TTAGAGAAGAATAG

Upstream 100 bases:

>100_bases
AGAGCCCCTTTGTGGAAAATGAATAAAAGACCAAAGGCAATACCGAACAAAAATCCTGTACGCCAAGAGGATTTTAGAAA
AAAATTTAGGGGGAACAACA

Downstream 100 bases:

>100_bases
AATTAATATAATAATCCTTATAATAATTATTTTAAATATATATTATTATGATCCTAATATAAAATATGCAGAGGAATTAG
ATATACCTGCGGGAATAGGC

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MENSRNNVLTTSQTIVIIVGSMLGIGILSLPANLSKIAHNDGWIGVVIGSLYPLYMGLCAILIFKDNSYQNTNIIEISKN
YFGKILGSSLSFIFTFQFFAYIIITAANMSNMLRVYLVLFLEQYKLAIPILLISVYTASKGIRALGRINEIIFYASIPLI
LLTVLGIKQGNILNIQPILGNPFSSILKASIEPVYSFVGIEIIFLIVPLMQDKSKIKSSFLKSISIIVFLYIWLSFVSIY
YLGADVAKNLYWPTLSLAETIAIPGISNFKFVFMFLWSNIIFKTIANQNYFFYYSLSSIFKKINSSILYMIVFFFATIIV
TRLYSFILLQKINKGISIFYLIFNLIFITTITAIKIIKNGGKNEKTNAKDNENFREE

Sequences:

>Translated_377_residues
MENSRNNVLTTSQTIVIIVGSMLGIGILSLPANLSKIAHNDGWIGVVIGSLYPLYMGLCAILIFKDNSYQNTNIIEISKN
YFGKILGSSLSFIFTFQFFAYIIITAANMSNMLRVYLVLFLEQYKLAIPILLISVYTASKGIRALGRINEIIFYASIPLI
LLTVLGIKQGNILNIQPILGNPFSSILKASIEPVYSFVGIEIIFLIVPLMQDKSKIKSSFLKSISIIVFLYIWLSFVSIY
YLGADVAKNLYWPTLSLAETIAIPGISNFKFVFMFLWSNIIFKTIANQNYFFYYSLSSIFKKINSSILYMIVFFFATIIV
TRLYSFILLQKINKGISIFYLIFNLIFITTITAIKIIKNGGKNEKTNAKDNENFREE
>Mature_377_residues
MENSRNNVLTTSQTIVIIVGSMLGIGILSLPANLSKIAHNDGWIGVVIGSLYPLYMGLCAILIFKDNSYQNTNIIEISKN
YFGKILGSSLSFIFTFQFFAYIIITAANMSNMLRVYLVLFLEQYKLAIPILLISVYTASKGIRALGRINEIIFYASIPLI
LLTVLGIKQGNILNIQPILGNPFSSILKASIEPVYSFVGIEIIFLIVPLMQDKSKIKSSFLKSISIIVFLYIWLSFVSIY
YLGADVAKNLYWPTLSLAETIAIPGISNFKFVFMFLWSNIIFKTIANQNYFFYYSLSSIFKKINSSILYMIVFFFATIIV
TRLYSFILLQKINKGISIFYLIFNLIFITTITAIKIIKNGGKNEKTNAKDNENFREE

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 42671; Mature: 42671

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSRNNVLTTSQTIVIIVGSMLGIGILSLPANLSKIAHNDGWIGVVIGSLYPLYMGLCA
CCCCCCCEEECCCCCEEEEHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ILIFKDNSYQNTNIIEISKNYFGKILGSSLSFIFTFQFFAYIIITAANMSNMLRVYLVLF
EEEEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQYKLAIPILLISVYTASKGIRALGRINEIIFYASIPLILLTVLGIKQGNILNIQPILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
NPFSSILKASIEPVYSFVGIEIIFLIVPLMQDKSKIKSSFLKSISIIVFLYIWLSFVSIY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGADVAKNLYWPTLSLAETIAIPGISNFKFVFMFLWSNIIFKTIANQNYFFYYSLSSIF
HHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHH
KKINSSILYMIVFFFATIIVTRLYSFILLQKINKGISIFYLIFNLIFITTITAIKIIKNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GKNEKTNAKDNENFREE
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MENSRNNVLTTSQTIVIIVGSMLGIGILSLPANLSKIAHNDGWIGVVIGSLYPLYMGLCA
CCCCCCCEEECCCCCEEEEHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ILIFKDNSYQNTNIIEISKNYFGKILGSSLSFIFTFQFFAYIIITAANMSNMLRVYLVLF
EEEEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQYKLAIPILLISVYTASKGIRALGRINEIIFYASIPLILLTVLGIKQGNILNIQPILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
NPFSSILKASIEPVYSFVGIEIIFLIVPLMQDKSKIKSSFLKSISIIVFLYIWLSFVSIY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGADVAKNLYWPTLSLAETIAIPGISNFKFVFMFLWSNIIFKTIANQNYFFYYSLSSIF
HHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHH
KKINSSILYMIVFFFATIIVTRLYSFILLQKINKGISIFYLIFNLIFITTITAIKIIKNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GKNEKTNAKDNENFREE
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]